Thermoplasmatales: Difference between revisions

From Wikipedia, the free encyclopedia
Content deleted Content added
m CS1 maint: Explicit use of et al. -> display-authors=etal using AWB
m WP:GenFixes, ref cleanup, parse authN/edN using AWB
Line 64: Line 64:
{{reflist|1}}
{{reflist|1}}


* {{cite book | author=Madigan, M.T. and Martinko, J.M. | title=Brock Biology of Microorganisms, 11th Ed. | publisher=Pearson Prentice Hall | year=2005 }}
* {{cite book | author=Madigan, M.T. | author2=Martinko, J.M. | last-author-amp=yes | title=Brock Biology of Microorganisms | edition=11th | publisher=Pearson Prentice Hall | date=2005 }}


==Further reading==
==Further reading==
Line 72: Line 72:
* {{cite journal|last1=Hubrt|first1=Harald|last2=Stetter|first2=Karl O.|title=Prokaryotes|journal=Thermoplasmatales|date=2006|issue=The Prokaryotes|pages=101–102|doi=10.1007/0-387-30743-5_7}}
* {{cite journal|last1=Hubrt|first1=Harald|last2=Stetter|first2=Karl O.|title=Prokaryotes|journal=Thermoplasmatales|date=2006|issue=The Prokaryotes|pages=101–102|doi=10.1007/0-387-30743-5_7}}


* {{cite journal|last1=Oueriaghli|first1=Nahid|last2=Bejar|first2=Victoria|last3=Quesada|first3=Emilia|last4=Martinez-Checa|first4=Fernando|title=Molecular Ecology Techniques Reveal Both Spatial and Temporal Variations in the Diversity of Archaeal Communities within the Athalassohaline Environment of Rambla Salada, Spain|journal=MICROBIAL ECOLOGY|volume=66|issue=2|pages=297–311|doi=10.1007/s00248-013-0176-5|pmid=23354292|accessdate=12 November 2014}}
* {{cite journal|last1=Oueriaghli|first1=Nahid|last2=Bejar|first2=Victoria|last3=Quesada|first3=Emilia|last4=Martinez-Checa|first4=Fernando|title=Molecular Ecology Techniques Reveal Both Spatial and Temporal Variations in the Diversity of Archaeal Communities within the Athalassohaline Environment of Rambla Salada, Spain|journal=MICROBIAL ECOLOGY|volume=66|issue=2|pages=297–311|doi=10.1007/s00248-013-0176-5|pmid=23354292}}<!--|accessdate=12 November 2014-->


* {{cite journal|last1=Paul|first1=Kristina|last2=Nonoh|first2=James O.|last3=Mikulski|first3=Lena|last4=Brune|first4=Andreas|title="Methanoplasmatales," Thermoplasmatales-Related Archaea in Termite Guts and Other Environments, Are the Seventh Order of Methanogens|journal=Applied and Environmental Microbiology|volume=78|issue=23|pages=8245–8253|doi=10.1128/AEM.02193-12}}
* {{cite journal|last1=Paul|first1=Kristina|last2=Nonoh|first2=James O.|last3=Mikulski|first3=Lena|last4=Brune|first4=Andreas|title="Methanoplasmatales," Thermoplasmatales-Related Archaea in Termite Guts and Other Environments, Are the Seventh Order of Methanogens|journal=Applied and Environmental Microbiology|volume=78|issue=23|pages=8245–8253|doi=10.1128/AEM.02193-12}}
Line 80: Line 80:
===Scientific books===
===Scientific books===


* {{cite book | last = Reysenbach | first = A-L | year = 2001 | chapter = Order I. Thermoplasmatales ord. nov. | title = Bergey's Manual of Systematic Bacteriology Volume 1: The Archaea and the deeply branching and phototrophic Bacteria | edition = 2nd ed. | editor = DR Boone and RW Castenholz, eds. | publisher = Springer Verlag | location = New York | isbn = 978-0-387-98771-2 | page = 169 }}
* {{cite book | last = Reysenbach | first = A-L | date = 2001 | chapter = Order I. Thermoplasmatales ord. nov. | title = Bergey's Manual of Systematic Bacteriology Volume 1: The Archaea and the deeply branching and phototrophic Bacteria | edition = 2nd| editor = DR Boone| editor2 = RW Castenholz | publisher = Springer Verlag | location = New York | isbn = 978-0-387-98771-2 | page = 169 }}


* {{cite book | last = Reysenbach | first = A-L | year = 2001 | chapter = Class IV. Thermoplasmata class. nov. | title = Bergey's Manual of Systematic Bacteriology Volume 1: The Archaea and the deeply branching and phototrophic Bacteria | edition = 2nd ed. | editor = DR Boone and RW Castenholz, eds. | publisher = Springer Verlag | location = New York | isbn = 978-0-387-98771-2 | page = 169 }}
* {{cite book | last = Reysenbach | first = A-L | date = 2001 | chapter = Class IV. Thermoplasmata class. nov. | title = Bergey's Manual of Systematic Bacteriology Volume 1: The Archaea and the deeply branching and phototrophic Bacteria | edition = 2nd| editor = DR Boone| editor2 = RW Castenholz | publisher = Springer Verlag | location = New York | isbn = 978-0-387-98771-2 | page = 169 }}


===Scientific databases===
===Scientific databases===

Revision as of 22:05, 17 May 2015

Thermoplasmatales
Scientific classification
Domain:
Kingdom:
Phylum:
Class:
Thermoplasmata Reysenbach 2002
Order:
Thermoplasmatales Reysenbach 2002
Families

In taxonomy, the Thermoplasmatales are an order of the Thermoplasmata.[1] All are acidophiles, growing optimally at pH below 2. Picrophilus is currently the most acidophilic of all known organisms growing at a minimum pH of 0.06.[2] Many of these organisms do not contain a cell wall, although this is not true in the case of Picrophilus. Most of members of the Thermotoplasmata are thermophilic.

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[3] and National Center for Biotechnology Information (NCBI)[4] and the phylogeny is based on 16S rRNA-based LTP release 106 by 'The All-Species Living Tree' Project.[5]

Thermogymnomonas acidicola Itoh et al. 2007

  Thermoplasma

T. acidophilum Darland et al. 1970 (type sp.)

T. volcanium Segerer et al. 1988

  Picrophilus

P. oshimae Schleper et al. 1996 (type sp.)

P. torridus Zillig et al. 1996

  Ferroplasmaceae
  Acidiplasma

A. aeolicum Golyshina et al. 2009 (type sp.)

A. cupricumulans (Hawkes et al. 2008) Golyshina et al. 2009

  Ferroplasma

?F. acidarmanusDopson et al. 2004

?F. thermophilumZhou et al. 2008

F. acidiphilum Golyshina et al. 2000 (type sp.)

Notes:
♠ Strains found at the National Center for Biotechnology Information (NCBI) but not listed in the List of Prokaryotic names with Standing in Nomenclature LPSN

References

  1. ^ See the NCBI webpage on Thermoplasmatales. Data extracted from the "NCBI taxonomy resources". National Center for Biotechnology Information. Retrieved 2007-03-19.
  2. ^ Life in the Universe: Expectations and Constraints
  3. ^ J.P. Euzéby. "Thermoplasmataceae". List of Prokaryotic names with Standing in Nomenclature (LPSN) [1]. Retrieved 2011-11-17. {{cite web}}: External link in |publisher= (help)
  4. ^ Sayers; et al. "Thermoplasmataceae". National Center for Biotechnology Information (NCBI) taxonomy database [2]. Retrieved 2011-06-05. {{cite web}}: External link in |publisher= (help)
  5. ^ All-Species Living Tree Project."16S rRNA-based LTP release 106 (full tree)" (PDF). Silva Comprehensive Ribosomal RNA Database [3]. Retrieved 2011-11-17. {{cite web}}: External link in |publisher= (help)
  • Madigan, M.T.; Martinko, J.M. (2005). Brock Biology of Microorganisms (11th ed.). Pearson Prentice Hall. {{cite book}}: Unknown parameter |last-author-amp= ignored (|name-list-style= suggested) (help)

Further reading

Scientific journals

  • Hubrt, Harald; Stetter, Karl O. (2006). "Prokaryotes". Thermoplasmatales (The Prokaryotes): 101–102. doi:10.1007/0-387-30743-5_7.
  • Oueriaghli, Nahid; Bejar, Victoria; Quesada, Emilia; Martinez-Checa, Fernando. "Molecular Ecology Techniques Reveal Both Spatial and Temporal Variations in the Diversity of Archaeal Communities within the Athalassohaline Environment of Rambla Salada, Spain". MICROBIAL ECOLOGY. 66 (2): 297–311. doi:10.1007/s00248-013-0176-5. PMID 23354292.
  • Paul, Kristina; Nonoh, James O.; Mikulski, Lena; Brune, Andreas. ""Methanoplasmatales," Thermoplasmatales-Related Archaea in Termite Guts and Other Environments, Are the Seventh Order of Methanogens". Applied and Environmental Microbiology. 78 (23): 8245–8253. doi:10.1128/AEM.02193-12.
  • Snelling, Timothy J; Genc, Bugra; McKain, Nest; Watson, Mick; Waters, Sinead M.; Creevey, Christopher J.; Wallace, R. John. "Diversity and Community Composition of Methanogenic Archaea in the Rumen of Scottish Upland Sheep Assessed by Different Methods". 9 (9): e106491. doi:10.1371/journal.pone.0106491. {{cite journal}}: Cite journal requires |journal= (help)CS1 maint: unflagged free DOI (link)

Scientific books

  • Reysenbach, A-L (2001). "Order I. Thermoplasmatales ord. nov.". In DR Boone; RW Castenholz (eds.). Bergey's Manual of Systematic Bacteriology Volume 1: The Archaea and the deeply branching and phototrophic Bacteria (2nd ed.). New York: Springer Verlag. p. 169. ISBN 978-0-387-98771-2.
  • Reysenbach, A-L (2001). "Class IV. Thermoplasmata class. nov.". In DR Boone; RW Castenholz (eds.). Bergey's Manual of Systematic Bacteriology Volume 1: The Archaea and the deeply branching and phototrophic Bacteria (2nd ed.). New York: Springer Verlag. p. 169. ISBN 978-0-387-98771-2.

Scientific databases

Template:Taxonomic references

External links

Template:Taxonomic links