Nidogen-2: Difference between revisions

NID2
Identifiers
Aliases	NID2, NID-2, nidogen 2
External IDs	OMIM: 605399 MGI: 1298229 HomoloGene: 40575 GeneCards: NID2
Gene location (Human)
Chr.	Chromosome 14 (human)
End	52,069,059 bp
Gene location (Mouse)
Chr.	Chromosome 14 (mouse)
End	19,861,855 bp
RNA expression pattern
	Top expressed in
	stromal cell of endometrium; ; tibia; ; right lobe of thyroid gland; ; left lobe of thyroid gland; ; parietal pleura; ; secondary oocyte; ; tibial nerve; ; gastric mucosa; ; left ventricle; ; gallbladder;
	Top expressed in
	yolk sac; ; dermis; ; endocardial cushion; ; calvaria; ; abdominal wall; ; atrioventricular valve; ; atrium; ; belly cord; ; left lung lobe; ; vas deferens;
	More reference expression data
	More reference expression data
Gene ontology
Molecular function	calcium ion binding; protein binding; collagen binding; extracellular matrix structural constituent;
Cellular component	extracellular matrix; extracellular region; basement membrane; extracellular exosome; extracellular space; plasma membrane; collagen-containing extracellular matrix;
Biological process	cell adhesion; cell-matrix adhesion; extracellular matrix organization; basement membrane organization;
	Sources:Amigo / QuickGO
Orthologs
	22795
	18074
	ENSG00000087303
	ENSMUSG00000021806
	Q14112
	O88322
	NM_007361
	NM_008695
	NP_031387
	NP_032721
	Wikidata
View/Edit Human	View/Edit Mouse

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Revision as of 06:44, 20 May 2016

Nidogen-2, also known as osteonidogen, is a basal lamina protein of the nidogen family. It was the second nidogen to be described after nidogen-1 (entactin). Both play key roles during late embryonic development.^[5] In humans it is encoded by the NID2 gene.^[6]^[7]

References

^ ^a ^b ^c GRCh38: Ensembl release 89: ENSG00000087303 – Ensembl, May 2017
^ ^a ^b ^c GRCm38: Ensembl release 89: ENSMUSG00000021806 – Ensembl, May 2017
^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
^ Miosge N, Holzhausen S, Zelent C, Sprysch P, Herken R (2002). "Nidogen-1 and nidogen-2 are found in basement membranes during human embryonic development". The Histochemical Journal. 33 (9–10): 523–30. doi:10.1023/A:1014995523521. PMID 12005023.
^ Kohfeldt E, Sasaki T, Göhring W, Timpl R (Sep 1998). "Nidogen-2: a new basement membrane protein with diverse binding properties". Journal of Molecular Biology. 282 (1): 99–109. doi:10.1006/jmbi.1998.2004. PMID 9733643.
^ "Entrez Gene: NID2 nidogen 2 (osteonidogen)".

Ulazzi L, Sabbioni S, Miotto E, Veronese A, Angusti A, Gafà R, Manfredini S, Farinati F, Sasaki T, Lanza G, Negrini M (2007). "Nidogen 1 and 2 gene promoters are aberrantly methylated in human gastrointestinal cancer". Molecular Cancer. 6 (1): 17. doi:10.1186/1476-4598-6-17. PMC 1831485. PMID 17328794.{{cite journal}}: CS1 maint: unflagged free DOI (link)
Nischt R, Schmidt C, Mirancea N, Baranowsky A, Mokkapati S, Smyth N, Woenne EC, Stark HJ, Boukamp P, Breitkreutz D (Mar 2007). "Lack of nidogen-1 and -2 prevents basement membrane assembly in skin-organotypic coculture". The Journal of Investigative Dermatology. 127 (3): 545–54. doi:10.1038/sj.jid.5700562. PMID 17008882.
Rual JF, Venkatesan K, Hao T, Hirozane-Kishikawa T, Dricot A, Li N, Berriz GF, Gibbons FD, Dreze M, Ayivi-Guedehoussou N, Klitgord N, Simon C, Boxem M, Milstein S, Rosenberg J, Goldberg DS, Zhang LV, Wong SL, Franklin G, Li S, Albala JS, Lim J, Fraughton C, Llamosas E, Cevik S, Bex C, Lamesch P, Sikorski RS, Vandenhaute J, Zoghbi HY, Smolyar A, Bosak S, Sequerra R, Doucette-Stamm L, Cusick ME, Hill DE, Roth FP, Vidal M (Oct 2005). "Towards a proteome-scale map of the human protein-protein interaction network". Nature. 437 (7062): 1173–8. doi:10.1038/nature04209. PMID 16189514.
Miosge N, Sasaki T, Timpl R (Nov 2002). "Evidence of nidogen-2 compensation for nidogen-1 deficiency in transgenic mice". Matrix Biology. 21 (7): 611–21. doi:10.1016/S0945-053X(02)00070-7. PMID 12475645.
Tu H, Sasaki T, Snellman A, Göhring W, Pirilä P, Timpl R, Pihlajaniemi T (Jun 2002). "The type XIII collagen ectodomain is a 150-nm rod and capable of binding to fibronectin, nidogen-2, perlecan, and heparin". The Journal of Biological Chemistry. 277 (25): 23092–9. doi:10.1074/jbc.M107583200. PMID 11956183.{{cite journal}}: CS1 maint: unflagged free DOI (link)
Sasaki T, Göhring W, Mann K, Brakebusch C, Yamada Y, Fässler R, Timpl R (Dec 2001). "Short arm region of laminin-5 gamma2 chain: structure, mechanism of processing and binding to heparin and proteins". Journal of Molecular Biology. 314 (4): 751–63. doi:10.1006/jmbi.2001.5176. PMID 11733994.
Sasaki T, Göhring W, Miosge N, Abrams WR, Rosenbloom J, Timpl R (Oct 1999). "Tropoelastin binding to fibulins, nidogen-2 and other extracellular matrix proteins". FEBS Letters. 460 (2): 280–4. doi:10.1016/S0014-5793(99)01362-9. PMID 10544250.
Bonaldo MF, Lennon G, Soares MB (Sep 1996). "Normalization and subtraction: two approaches to facilitate gene discovery". Genome Research. 6 (9): 791–806. doi:10.1101/gr.6.9.791. PMID 8889548.

[refGRCh38Ensembl-1] GRCh38: Ensembl release 89: ENSG00000087303 – Ensembl, May 2017

[refGRCm38Ensembl-2] GRCm38: Ensembl release 89: ENSMUSG00000021806 – Ensembl, May 2017

[3] "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.

[4] "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.

[5] Miosge N, Holzhausen S, Zelent C, Sprysch P, Herken R (2002). "Nidogen-1 and nidogen-2 are found in basement membranes during human embryonic development". The Histochemical Journal. 33 (9–10): 523–30. doi:10.1023/A:1014995523521. PMID 12005023.

[pmid9733643-6] Kohfeldt E, Sasaki T, Göhring W, Timpl R (Sep 1998). "Nidogen-2: a new basement membrane protein with diverse binding properties". Journal of Molecular Biology. 282 (1): 99–109. doi:10.1006/jmbi.1998.2004. PMID 9733643.

[entrez-7] "Entrez Gene: NID2 nidogen 2 (osteonidogen)".

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+{{Infobox_gene}}
-{{PBB|geneid=22795}}
 '''Nidogen-2''', also known as '''osteonidogen''', is a [[basal lamina]] [[protein]] of the [[nidogen]] family. It was the second nidogen to be described after [[nidogen-1]] (entactin).  Both play key roles during late [[embryonic development]].<ref>{{cite journal | vauthors = Miosge N, Holzhausen S, Zelent C, Sprysch P, Herken R | title = Nidogen-1 and nidogen-2 are found in basement membranes during human embryonic development | journal = The Histochemical Journal | volume = 33 | issue = 9-10 | pages = 523–30 | year = 2002 | pmid = 12005023 | doi = 10.1023/A:1014995523521 }}</ref> In humans it is encoded by the ''NID2'' [[gene]].<ref name="pmid9733643">{{cite journal | vauthors = Kohfeldt E, Sasaki T, Göhring W, Timpl R | title = Nidogen-2: a new basement membrane protein with diverse binding properties | journal = Journal of Molecular Biology | volume = 282 | issue = 1 | pages = 99–109 | date = Sep 1998 | pmid = 9733643 | pmc =  | doi = 10.1006/jmbi.1998.2004 }}</ref><ref name="entrez">{{cite web | title = Entrez Gene: NID2 nidogen 2 (osteonidogen)| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=22795| accessdate = }}</ref>

Revision as of 06:44, 20 May 2016

References

Further reading