Novosphingobium: Difference between revisions
Content deleted Content added
GreenC bot (talk | contribs) Move 1 url. Wayback Medic 2.5 |
m cite repair; |
||
(7 intermediate revisions by 6 users not shown) | |||
Line 1: | Line 1: | ||
{{Short description|Genus of bacteria}} |
|||
{{Italic title}} |
|||
{{Automatic taxobox |
|||
{{Taxobox |
|||
| |
| image = |
||
| image_alt = |
|||
| name = Novosphingobium |
|||
| image_caption = |
|||
| regnum = [[Bacterium|Bacteria]] |
|||
| taxon = Novosphingobium |
|||
| phylum = [[Proteobacteria]] |
|||
| authority = Takeuchi ''et al''. 2001<ref>{{cite journal |vauthors=Takeuchi M, Hamana K, Hiraishi A | title = Proposal of the genus ''Sphingomonas sensu stricto'' and three new genera, ''Sphingobium'', ''Novosphingobium'' and ''Sphingopyxis'', on the basis of phylogenetic and chemotaxonomic analyses | journal = Int J Syst Evol Microbiol | year = 2001 | volume = 51 | issue = Pt 4 | pages = 1405–1417| doi = 10.1099/00207713-51-4-1405 | pmid = 11491340 | doi-access = free }}</ref> |
|||
| classis = Alpha Proteobacteria |
|||
| type_species = |
|||
| ordo = Sphingomonadales |
|||
| type_species_authority = |
|||
| familia = [[Sphingomonadaceae]] |
|||
| subdivision_ranks = [[Species]] |
|||
| genus = '''''Novosphingobium''''' |
|||
| subdivision_ref = |
|||
| subdivision_ranks = Species |
|||
| subdivision = |
| subdivision = [[#Species|See text]] |
||
| synonyms = |
|||
''[[Novosphingobium acidiphilum|N. acidiphilum]]''<ref name=Novosphingobium>{{cite journal|last1=Parte|first1=A.C.|title=Novosphingobium|journal=[[LPSN]]|url=https://lpsn.dsmz.de/genus/novosphingobium}}</ref><br> |
|||
| synonyms_ref = |
|||
''[[Novosphingobium aquaticum|N. aquaticum]]''<ref name=Novosphingobium/><br> |
|||
''[[Novosphingobium aquiterrae|N. aquiterrae]]''<ref name=Novosphingobium/><br> |
|||
''[[Novosphingobium arabidopsis|N. arabidopsis]]''<ref name=Novosphingobium/><br> |
|||
''[[Novosphingobium barchaimii|N. barchaimii]]''<ref name=Novosphingobium/><br> |
|||
''[[Novosphingobium capsulatum|N. capsulatum]]''<ref name=Novosphingobium/><br> |
|||
''[[Novosphingobium chloroacetimidivorans|N. chloroacetimidivorans]]''<ref name=Novosphingobium/><br> |
|||
''[[Novosphingobium endophyticum|N. endophyticum]]''<ref name=Novosphingobium/><br> |
|||
''[[Novosphingobium fluoreni|N. fluoreni]]''<ref name=Novosphingobium/><br> |
|||
''[[Novosphingobium fuchskuhlense|N. fuchskuhlense]]''<ref name=Novosphingobium/><br> |
|||
''[[Novosphingobium gossypii|N. gossypii]]''<ref name=Novosphingobium/><br> |
|||
''[[Novosphingobium hassiacum|N. hassiacum]]''<ref name=Novosphingobium/><br> |
|||
''[[Novosphingobium indicum|N. indicum]]''<ref name=Novosphingobium/><br> |
|||
''[[Novosphingobium kunmingense|N. kunmingense]]''<ref name=Novosphingobium/><br> |
|||
''[[Novosphingobium lentum|N. lentum]]''<ref name=Novosphingobium/><br> |
|||
''[[Novosphingobium lindaniclasticum|N. lindaniclasticum]]''<ref name=Novosphingobium/><br> |
|||
''[[Novosphingobium malaysiense|N. malaysiense]]''<ref name=Novosphingobium/><br> |
|||
''[[Novosphingobium marinum|N. marinum]]''<ref name=Novosphingobium/><br> |
|||
''[[Novosphingobium mathurense|N. mathurense]]''<ref name=Novosphingobium/><br> |
|||
''[[Novosphingobium naphthalenivorans|N. naphthalenivorans]]''<ref name=Novosphingobium/><br> |
|||
''[[Novosphingobium nitrogenifigens|N. nitrogenifigens]]''<ref name=Novosphingobium/><br> |
|||
''[[Novosphingobium oryzae|N. oryzae]]''<ref name=Novosphingobium/><br> |
|||
''[[Novosphingobium panipatense|N. panipatense]]''<ref name=Novosphingobium/><br> |
|||
''[[Novosphingobium pentaromativorans|N. pentaromativorans]]''<ref name=Novosphingobium/><br> |
|||
''[[Novosphingobium resinovorum|N. resinovorum]]''<ref name=Novosphingobium/><br> |
|||
''[[Novosphingobium rhizosphaerae|N. rhizosphaerae]]''<ref name=Novosphingobium/><br> |
|||
''[[Novosphingobium rosa|N. rosa]]''<ref name=Novosphingobium/><br> |
|||
''[[Novosphingobium sediminicola|N. sediminicola]]''<ref name=Novosphingobium/><br> |
|||
''[[Novosphingobium soli|N. soli]]''<ref name=Novosphingobium/><br> |
|||
''[[Novosphingobium stygium|N. stygium]]''<ref name=Novosphingobium/><br> |
|||
''[[Novosphingobium subarcticum|N. subarcticum]]''<ref name=Novosphingobium/><br> |
|||
''[[Novosphingobium subterraneum|N. subterraneum]]''<ref name=Novosphingobium/><br> |
|||
''[[Novosphingobium taihuense|N. taihuense]]''<ref name=Novosphingobium/><br> |
|||
''[[Novosphingobium tardaugens|N. tardaugens]]''<ref name=Novosphingobium/> |
|||
}} |
}} |
||
'''''Novosphingobium''''' is a [[genus]] of [[Gram-negative bacteria]] that includes ''N. taihuense'', which can [[biodegradation|degrade]] [[aromatic]] compounds such as [[phenol]], [[aniline]], [[nitrobenzene]] and [[phenanthrene]].<ref> |
'''''Novosphingobium''''' is a [[genus]] of [[Gram-negative bacteria]] that includes ''N. taihuense'', which can [[biodegradation|degrade]] [[aromatic]] compounds such as [[phenol]], [[aniline]], [[nitrobenzene]] and [[phenanthrene]].<ref>{{cite journal|author1=Z.P. Liu|author2=B.J. Wang|author3=Y.H. Liu|author4=S.J. Liu|date=May 2005|title=''Novosphingobium taihuense'' sp nov., a novel aromatic-compound-degrading bacterium isolated from Lake Tai, China|journal=Int. J. Syst. Evol. Microbiol.|volume=55|pages=1229–1232|doi=10.1099/ijs.0.63468-0|pmid=15879260|issue=Pt 3|doi-access=free}}</ref> The species ''N. aromativorans'', which was first found in [[Ulsan Bay]], similarly degrades [[aromatic]] molecules of two to five rings.<ref>{{cite journal|author1=J.H. Sohn|author2=K.K. Kwon|author3=J.-H. Kang|author4=H.-B. Jung|author5=S.-J. Kim|year=2004|title=''Novosphingobium pentaromativorans'' sp. nov., a high-molecular-mass polycyclic aromatic hydrocarbon-degrading bacterium isolated from estuarine sediment|journal=Int. J. Syst. Evol. Microbiol.|volume=54|pages=1483–1487|doi=10.1099/ijs.0.02945-0|pmid=15388699|issue=Pt 5|doi-access=free}}</ref> |
||
{{cite journal |
|||
==Species== |
|||
|author1=Z.P. Liu |author2=B.J. Wang |author3=Y.H. Liu |author4=S.J. Liu |date=May 2005 |
|||
===Accepted Species=== |
|||
|title=Novosphingobium taihuense sp nov., a novel aromatic-compound-degrading bacterium isolated from [[Lake Tai]], China |
|||
''Novosphingobium'' comprises the following species:<ref name="LPSN">{{cite web|vauthors=Euzéby JP, Parte AC |url=https://lpsn.dsmz.de/genus/novosphingobium |title=''Novosphingobium'' |access-date=June 5, 2021 |publisher=[[List of Prokaryotic names with Standing in Nomenclature]] (LPSN)}}</ref> |
|||
|journal=Int. J. Syst. Evol. Microbiol. |
|||
{{div col|colwidth=500px}} |
|||
|volume=55 |
|||
* ''[[Novosphingobium acidiphilum]]'' <small>Glaeser ''et al''. 2009</small> |
|||
|pages=1229–1232 |
|||
* ''[[Novosphingobium aquaticum]]'' <small>Glaeser ''et al''. 2013</small> |
|||
|doi=10.1099/ijs.0.63468-0 |
|||
* ''[[Novosphingobium aquimarinum]]'' <small>Le ''et al''. 2020</small> |
|||
|pmid=15879260 |
|||
* ''[[Novosphingobium aquiterrae]]'' <small>Lee ''et al''. 2014</small> |
|||
|issue=Pt 3 |
|||
* ''[[Novosphingobium arabidopsis]]'' <small>Lin ''et al''. 2014</small> |
|||
}}</ref> The species ''N. aromativorans'', which was first found in [[Ulsan Bay]], similarly degrades [[aromatic]] molecules of two to five rings.<ref> |
|||
* ''[[Novosphingobium aromaticivorans]]'' <small>corrig. (Balkwill ''et al''. 1997) Takeuchi ''et al''. 2001</small> |
|||
{{cite journal |
|||
<!-- Novosphingobium aromaticivorum is a misspelling of Novosphingobium aromaticivorans. --> |
|||
|author1=J.H. Sohn |author2=K.K. Kwon |author3=J.-H. Kang |author4=H.-B. Jung |author5=S.-J. Kim | year = 2004 |
|||
* ''[[Novosphingobium arvoryzae]]'' <small>Sheu ''et al''. 2018</small> |
|||
| title = ''Novosphingobium pentaromativorans'' sp. nov., a high-molecular-mass polycyclic aromatic hydrocarbon-degrading bacterium isolated from estuarine sediment |
|||
* ''[[Novosphingobium barchaimii]]'' <small>Niharika ''et al''. 2013</small> |
|||
| journal = Int. J. Syst. Evol. Microbiol. |
|||
* ''[[Novosphingobium bradum]]'' <small>Sheu ''et al''. 2016</small> |
|||
| volume = 54 |
|||
* ''[[Novosphingobium capsulatum]]'' <small>(Leifson 1962) Takeuchi ''et al''. 2001</small> |
|||
| pages = 1483–1487 |
|||
* ''[[Novosphingobium chloroacetimidivorans]]'' <small>Chen ''et al''. 2014</small> |
|||
| doi = 10.1099/ijs.0.02945-0 |
|||
* ''[[Novosphingobium clariflavum]]'' <small>Zhang ''et al''. 2017</small> |
|||
| pmid = 15388699 |
|||
* ''[[Novosphingobium colocasiae]]'' <small>Chen ''et al''. 2016</small> |
|||
| issue = Pt 5 |
|||
* ''[[Novosphingobium endophyticum]]'' <small>Li ''et al''. 2016</small> |
|||
}}</ref> |
|||
* ''[[Novosphingobium flavum]]'' <small>Nguyen ''et al''. 2016</small> |
|||
* ''[[Novosphingobium fluoreni]]'' <small>Gao ''et al''. 2015</small> |
|||
* ''[[Novosphingobium fontis]]'' <small>Sheu ''et al''. 2017</small> |
|||
* ''[[Novosphingobium fuchskuhlense]]'' <small>Glaeser ''et al''. 2013</small> |
|||
* ''[[Novosphingobium gossypii]]'' <small>Kämpfer ''et al''. 2015</small> |
|||
* ''[[Novosphingobium guangzhouense]]'' <small>Sha ''et al''. 2017</small> |
|||
* ''[[Novosphingobium hassiacum]]'' <small>Kämpfer et al. 2002</small> |
|||
* ''[[Novosphingobium humi]]'' <small>Hyeon ''et al''. 2017</small> |
|||
* ''[[Novosphingobium indicum]]'' <small>Yuan ''et al''. 2009</small> |
|||
* ''[[Novosphingobium ipomoeae]]'' <small>Chen ''et al''. 2017</small> |
|||
* ''[[Novosphingobium kunmingense]]'' <small>Xie ''et al''. 2014</small> |
|||
* ''[[Novosphingobium lentum]]'' <small>Tiirola ''et al''. 2005</small> |
|||
* ''[[Novosphingobium lindaniclasticum]]'' <small>Saxena ''et al''. 2013</small> |
|||
* ''[[Novosphingobium lotistagni]]'' <small>Ngo ''et al''. 2016</small> |
|||
* ''[[Novosphingobium lubricantis]]'' <small>Kämpfer ''et al''. 2018</small> |
|||
* ''[[Novosphingobium malaysiense]]'' <small>Lee ''et al''. 2014</small> |
|||
* ''[[Novosphingobium marinum]]'' <small>Huo ''et al''. 2015</small> |
|||
* ''[[Novosphingobium mathurense]]'' <small>Gupta ''et al''. 2009</small> |
|||
* ''[[Novosphingobium meiothermophilum]]'' <small>Xian ''et al''. 2019</small> |
|||
* ''[[Novosphingobium naphthae]]'' <small>Chaudhary and Kim 2016</small> |
|||
* ''[[Novosphingobium naphthalenivorans]]'' <small>Suzuki and Hiraishi 2008</small> |
|||
* ''[[Novosphingobium nitrogenifigens]]'' <small>Addison ''et al''. 2007</small> |
|||
* ''[[Novosphingobium olei]]'' <small>Chaudhary ''et al''. 2021</small> |
|||
* ''[[Novosphingobium oryzae]]'' <small>Zhang ''et al''. 2016</small> |
|||
* ''[[Novosphingobium ovatum]]'' <small>Chen ''et al''. 2020</small> |
|||
* ''[[Novosphingobium panipatense]]'' <small>Gupta ''et al''. 2009</small> |
|||
* ''[[Novosphingobium pentaromativorans]]'' <small>Sohn ''et al''. 2004</small> |
|||
* ''[[Novosphingobium piscinae]]'' <small>Sheu ''et al''. 2016</small> |
|||
* ''[[Novosphingobium pokkalii]]'' <small>Krishnan ''et al''. 2017</small> |
|||
* ''[[Novosphingobium resinovorum]]'' <small>(Delaporte and Daste 1956) Lim ''et al''. 2007</small> |
|||
* ''[[Novosphingobium rhizosphaerae]]'' <small>Kämpfer ''et al''. 2015</small> |
|||
* ''[[Novosphingobium rosa]]'' <small>corrig. (Takeuchi ''et al''. 1995) Takeuchi ''et al''. 2001</small> |
|||
<!-- Novosphingobium roseae is a misspelling of Novosphingobium rosa. --> |
|||
* ''[[Novosphingobium sediminicola]]'' <small>Baek ''et al''. 2011</small> |
|||
* ''[[Novosphingobium silvae]]'' <small>Feng ''et al''. 2020</small> |
|||
* ''[[Novosphingobium soli]]'' <small>Kämpfer ''et al''. 2011</small> |
|||
<!-- Novosphingobium stygiae is a misspelling of Novosphingobium stygium. --> |
|||
* ''[[Novosphingobium stygium]]'' <small>corrig. (Balkwill ''et al''. 1997) Takeuchi ''et al''. 2001</small> |
|||
<!-- Novosphingobium subarcticum was reclassified as Novosphingobium resinovorum. --> |
|||
<!-- Novosphingobium subterraneae is a misspelling of Novosphingobium subterraneum. --> |
|||
* ''[[Novosphingobium subterraneum]]'' <small>corrig. (Balkwill ''et al''. 1997) Takeuchi ''et al''. 2001</small> |
|||
<!-- Novosphingobium suterraneae is a misspelling of Novosphingobium subterraneum. --> |
|||
* ''[[Novosphingobium taihuense]]'' <small>Liu ''et al''. 2005</small> |
|||
<!-- Novosphingobium tardaugens was reclassified as Caenibius tardaugens. --> |
|||
* ''[[Novosphingobium umbonatum]]'' <small>Sheu ''et al''. 2020</small> |
|||
{{div col end}} |
|||
===Provisional Species=== |
|||
The following species names have been published, but not validated according to the [[Bacteriological Code]]:<ref name="LPSN"/> |
|||
* "''Novosphingobium aquaticum''" <small>Singh ''et al''. 2015</small> |
|||
* "''Novosphingobium ginsenosidimutans''" <small>Kim ''et al''. 2013</small> |
|||
* "''Novosphingobium profundi''" <small>Zhang ''et al''. 2017</small> |
|||
* "''Novosphingobium sediminis''" <small>Li ''et al''. 2012</small> |
|||
* "''Novosphingobium tardum''" <small>Chen ''et al''. 2015</small> |
|||
==References== |
==References== |
||
{{Reflist}} |
{{Reflist|2}} |
||
{{Taxonbar|from=Q16986672}} |
{{Taxonbar|from=Q16986672}} |
||
Line 76: | Line 98: | ||
[[Category:Hydrocarbon-degrading bacteria]] |
[[Category:Hydrocarbon-degrading bacteria]] |
||
[[Category:Bacteria genera]] |
[[Category:Bacteria genera]] |
||
[[Category:Sphingomonadales]] |
|||
Latest revision as of 22:03, 12 May 2023
Novosphingobium | |
---|---|
Scientific classification | |
Domain: | Bacteria |
Phylum: | Pseudomonadota |
Class: | Alphaproteobacteria |
Order: | Sphingomonadales |
Family: | Erythrobacteraceae |
Genus: | Novosphingobium Takeuchi et al. 2001[1] |
Species | |
Novosphingobium is a genus of Gram-negative bacteria that includes N. taihuense, which can degrade aromatic compounds such as phenol, aniline, nitrobenzene and phenanthrene.[2] The species N. aromativorans, which was first found in Ulsan Bay, similarly degrades aromatic molecules of two to five rings.[3]
Species[edit]
Accepted Species[edit]
Novosphingobium comprises the following species:[4]
- Novosphingobium acidiphilum Glaeser et al. 2009
- Novosphingobium aquaticum Glaeser et al. 2013
- Novosphingobium aquimarinum Le et al. 2020
- Novosphingobium aquiterrae Lee et al. 2014
- Novosphingobium arabidopsis Lin et al. 2014
- Novosphingobium aromaticivorans corrig. (Balkwill et al. 1997) Takeuchi et al. 2001
- Novosphingobium arvoryzae Sheu et al. 2018
- Novosphingobium barchaimii Niharika et al. 2013
- Novosphingobium bradum Sheu et al. 2016
- Novosphingobium capsulatum (Leifson 1962) Takeuchi et al. 2001
- Novosphingobium chloroacetimidivorans Chen et al. 2014
- Novosphingobium clariflavum Zhang et al. 2017
- Novosphingobium colocasiae Chen et al. 2016
- Novosphingobium endophyticum Li et al. 2016
- Novosphingobium flavum Nguyen et al. 2016
- Novosphingobium fluoreni Gao et al. 2015
- Novosphingobium fontis Sheu et al. 2017
- Novosphingobium fuchskuhlense Glaeser et al. 2013
- Novosphingobium gossypii Kämpfer et al. 2015
- Novosphingobium guangzhouense Sha et al. 2017
- Novosphingobium hassiacum Kämpfer et al. 2002
- Novosphingobium humi Hyeon et al. 2017
- Novosphingobium indicum Yuan et al. 2009
- Novosphingobium ipomoeae Chen et al. 2017
- Novosphingobium kunmingense Xie et al. 2014
- Novosphingobium lentum Tiirola et al. 2005
- Novosphingobium lindaniclasticum Saxena et al. 2013
- Novosphingobium lotistagni Ngo et al. 2016
- Novosphingobium lubricantis Kämpfer et al. 2018
- Novosphingobium malaysiense Lee et al. 2014
- Novosphingobium marinum Huo et al. 2015
- Novosphingobium mathurense Gupta et al. 2009
- Novosphingobium meiothermophilum Xian et al. 2019
- Novosphingobium naphthae Chaudhary and Kim 2016
- Novosphingobium naphthalenivorans Suzuki and Hiraishi 2008
- Novosphingobium nitrogenifigens Addison et al. 2007
- Novosphingobium olei Chaudhary et al. 2021
- Novosphingobium oryzae Zhang et al. 2016
- Novosphingobium ovatum Chen et al. 2020
- Novosphingobium panipatense Gupta et al. 2009
- Novosphingobium pentaromativorans Sohn et al. 2004
- Novosphingobium piscinae Sheu et al. 2016
- Novosphingobium pokkalii Krishnan et al. 2017
- Novosphingobium resinovorum (Delaporte and Daste 1956) Lim et al. 2007
- Novosphingobium rhizosphaerae Kämpfer et al. 2015
- Novosphingobium rosa corrig. (Takeuchi et al. 1995) Takeuchi et al. 2001
- Novosphingobium sediminicola Baek et al. 2011
- Novosphingobium silvae Feng et al. 2020
- Novosphingobium soli Kämpfer et al. 2011
- Novosphingobium stygium corrig. (Balkwill et al. 1997) Takeuchi et al. 2001
- Novosphingobium subterraneum corrig. (Balkwill et al. 1997) Takeuchi et al. 2001
- Novosphingobium taihuense Liu et al. 2005
- Novosphingobium umbonatum Sheu et al. 2020
Provisional Species[edit]
The following species names have been published, but not validated according to the Bacteriological Code:[4]
- "Novosphingobium aquaticum" Singh et al. 2015
- "Novosphingobium ginsenosidimutans" Kim et al. 2013
- "Novosphingobium profundi" Zhang et al. 2017
- "Novosphingobium sediminis" Li et al. 2012
- "Novosphingobium tardum" Chen et al. 2015
References[edit]
- ^ Takeuchi M, Hamana K, Hiraishi A (2001). "Proposal of the genus Sphingomonas sensu stricto and three new genera, Sphingobium, Novosphingobium and Sphingopyxis, on the basis of phylogenetic and chemotaxonomic analyses". Int J Syst Evol Microbiol. 51 (Pt 4): 1405–1417. doi:10.1099/00207713-51-4-1405. PMID 11491340.
- ^ Z.P. Liu; B.J. Wang; Y.H. Liu; S.J. Liu (May 2005). "Novosphingobium taihuense sp nov., a novel aromatic-compound-degrading bacterium isolated from Lake Tai, China". Int. J. Syst. Evol. Microbiol. 55 (Pt 3): 1229–1232. doi:10.1099/ijs.0.63468-0. PMID 15879260.
- ^ J.H. Sohn; K.K. Kwon; J.-H. Kang; H.-B. Jung; S.-J. Kim (2004). "Novosphingobium pentaromativorans sp. nov., a high-molecular-mass polycyclic aromatic hydrocarbon-degrading bacterium isolated from estuarine sediment". Int. J. Syst. Evol. Microbiol. 54 (Pt 5): 1483–1487. doi:10.1099/ijs.0.02945-0. PMID 15388699.
- ^ a b Euzéby JP, Parte AC. "Novosphingobium". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved June 5, 2021.