Acidianus: Difference between revisions

From Wikipedia, the free encyclopedia
Browse history interactively
← Previous edit
Content deleted Content added
VisualWikitext
DrilBot (talk | contribs)
152,046 edits
m WikiProject Check Wikipedia cleanup (break in list) and general fixes
update template syntax
 
(45 intermediate revisions by 31 users not shown)
Line 1: Line 1:
{{Short description|Genus of archaea}}
{{Taxobox
{{Taxobox
| image = ODD.Bic.Fig1b.jpg
| color = #F3E0E0
| image_caption = ''Acidianus convivator'' cell showing extrusion of ''[[Acidianus two-tailed virus]]'' [[virion|particles]].
⚫
| name = ''Acidianus''
| domain = [[Archaea]]
| domain = [[Archaea]]
| regnum = [[Crenarchaeota]]
| phylum = [[Thermoproteota]]
| phylum = [[Crenarchaeota]]
| classis = [[Thermoprotei]]
| classis = [[Thermoprotei]]
| ordo = [[Sulfolobales]]
| ordo = [[Sulfolobales]]
| familia = [[Sulfolobaceae]]
| familia = [[Sulfolobaceae]]
| genus = ''Acidianus''
| genus = ''Acidianus''
| genus_authority = Segerer, Neuner, Kristjansson & Stetter, 1986
| genus_authority = Segerer, Neuner, Kristjansson & Stetter 1986
| subdivision_ranks = [[Species (biology)|Species]]
| subdivision_ranks = [[Species (biology)|Species]]
| subdivision =
| subdivision =
* ''[[Acidianus ambivalens|A. ambivalens]]''
* ''[[Acidianus ambivalens|A. ambivalens]]''
* ''[[Acidianus brierleyi|A. brierleyi]]''
* ''[[Acidianus brierleyi|A. brierleyi]]''
* ''[[Acidianus convivator|A. convivator]]''
* "''[[Acidianus convivator|A. convivator]]''"
* "''Ca.'' [[Acidianus copahuensis|A. copahuensis]]"
* "''[[Acidianus hospitalis|A. hospitalis]]''"
* ''[[Acidianus infernus|A. infernus]]''
* ''[[Acidianus infernus|A. infernus]]''
* ''[[Acidianus manzaensis|A. manzaensis]]''
* "''[[Acidianus manzaensis|A. manzaensis]]''"
* ''[[Acidianus pozzuoliensis|A. pozzuoliensis]]''
* "''[[Acidianus pozzuoliensis|A. pozzuoliensis]]''"
* ''[[Acidianus tengchongenses|A. tengchongenses]]''
* ''[[Acidianus sulfidivorans|A. sulfidivorans]]''
* "''[[Acidianus tengchongenses|A. tengchongenses]]''"
* "''[[Acidianus uzoniensis|A. uzoniensis]]''"
| synonyms =
| synonyms =
* ''Desulfurolobus Zillig & Bock 1987''
* "''Desulfurolobus''" <small>Zillig & Bock 1987</small>
* "''Sulfosphaerellus''" <small>Zhong et al. 1982</small>
}}
}}


In [[alpha taxonomy|taxonomy]], '''''Acidianus''''' is a [[genus (biology)|genus]] of the [[Sulfolobaceae]].<ref>See the [[National Center for Biotechnology Information|NCBI]] [http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=12914 webpage on Acidianus]. Data extracted from the {{cite web | url=ftp://ftp.ncbi.nih.gov/pub/taxonomy/ | title=NCBI taxonomy resources | publisher=[[National Center for Biotechnology Information]] | accessdate=2007-03-19}}</ref>
In [[alpha taxonomy|taxonomy]], '''''Acidianus''''' is a [[genus (biology)|genus]] of the [[Sulfolobaceae]].<ref name=NCBI />

==Phylogeny==
The currently accepted taxonomy is based on the [[List of Prokaryotic names with Standing in Nomenclature]] (LPSN) <ref>{{cite web|author=J.P. Euzéby |url=https://lpsn.dsmz.de/genus/acidianus |title=Acidianus |access-date=10 May 2023 |publisher=[[List of Prokaryotic names with Standing in Nomenclature]] (LPSN)}}</ref> and [[National Center for Biotechnology Information]] (NCBI)<ref name=NCBI>{{cite web |author = Sayers| url=https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Undef&id=12914&lvl=3&keep=1&srchmode=1&unlock |title=Acidianus |access-date=10 May 2023 |publisher=[[National Center for Biotechnology Information]] (NCBI) taxonomy database|display-authors=etal}}</ref>

{| class="wikitable"
|-
! colspan=1 | 16S rRNA based [[The All-Species Living Tree Project|LTP]]_06_2022<ref>{{cite web|title=The LTP |url=https://imedea.uib-csic.es/mmg/ltp/#LTP| access-date=10 May 2023}}</ref><ref>{{cite web|title=LTP_all tree in newick format| url=https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_all_06_2022.ntree |access-date=10 May 2023}}</ref><ref>{{cite web|title=LTP_06_2022 Release Notes| url=https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_06_2022_release_notes.pdf |access-date=10 May 2023}}</ref>
! colspan=1 | 53 marker proteins based [[Genome Taxonomy Database|GTDB]] 08-RS214<ref name="about">{{cite web |title=GTDB release 08-RS214 |url=https://gtdb.ecogenomic.org/about#4%7C |website=[[Genome Taxonomy Database]]|access-date=10 May 2023}}</ref><ref name="tree">{{cite web |title=ar53_r214.sp_label |url=https://data.gtdb.ecogenomic.org/releases/release214/214.0/auxillary_files/ar53_r214.sp_labels.tree |website=[[Genome Taxonomy Database]]|access-date=10 May 2023}}</ref><ref name="taxon_history">{{cite web |title=Taxon History |url=https://gtdb.ecogenomic.org/taxon_history/ |website=[[Genome Taxonomy Database]]|access-date=10 May 2023}}</ref>
|-
| style="vertical-align:top|
{{Clade|style= font-size:100%; line-height:90%
⚫
|label1=''Acidianus''
|1={{clade
|1=''[[Acidianus sulfidivorans|A. sulfidivorans]]''
|2={{clade
|1=''A. ambivalens''
|2=''[[Acidianus infernus|A. infernus]]''
}}
}}
}}
|
{{Clade|style= font-size:100%; line-height:90%
⚫
|label1=''Acidianus''
|1={{Clade
|1="''Ca.'' A. copahuensis" <small>Giaveno et al. 2013</small>
|2={{Clade
|1={{Clade
|1="''A. manzaensis''" <small>Yoshida et al. 2006</small>
|2=''[[Acidianus sulfidivorans|A. sulfidivorans]]'' <small>Plumb et al. 2007</small>
}}
|2={{Clade
|1=''[[Acidianus infernus|A. infernus]]'' <small>Segerer et al. 1986</small>
|2={{Clade
|1=''A. ambivalens'' <small>(Zillig & Böck 1987) Fuchs et al. 1996</small>
|2="''A. hospitalis''" <small>Bettstetter et al. 2003</small>
}}
}}
}}
}}
}}
|}

==See also==
⚫
* [[List of Archaea genera]]
* [[List of bacterial genera named after mythological figures]]


==References==
==References==
{{Reflist}}

{{reflist|1}}


==Further reading==
==Further reading==

===Scientific journals===
===Scientific journals===
* {{ cite journal | doi = 10.1099/00207713-36-4-559 | author = Segerer A | author2 = Neuner AM | author3 = Kristjansson JK | author4 = Stetter KO | date = 1986 | title = Acidianus infernus gen. nov., sp. nov., and Acidianus brierleyi comb. nov.: facultatively aerobic, extremely acidophilic thermophilic sulfur-metabolizing archaebacteria | journal = Int. J. Syst. Bacteriol. | volume = 36 | pages = 559–564 | issue = 4 | doi-access = free }}

* {{ cite journal | author = Segerer A, Neuner AM, Kristjansson JK, Stetter KO | date = 1986 | title = Acidianus infernus gen. nov., sp. nov., and Acidianus brierleyi comb. nov.: facultatively aerobic, extremely acidophilic thermophilic sulfur-metabolizing archaebacteria | journal = Int. J. Syst. Bacteriol. | volume = 36 | pages = 559&ndash;564 }}
* {{ cite journal | author = Zillig W | author2 = Yeats S | author3 = Holz I | author4 = Bock A | author5 = Rettenberger M | author6 = Gropp F | author7 = Simon G | date = 1986 | title = Desulfurolobus ambivalens, gen. nov., sp. nov., an autotrophic archaebacterium facultatively oxidizing or reducing sulfur | journal = Syst. Appl. Microbiol. | volume = 8 | issue = 3 | pages = 197–203 | doi=10.1016/s0723-2020(86)80077-7}}
* {{cite journal|last1=Giaveno|first1=M. Alejandra|last2=Urbieta|first2=M. Sofia|last3=Ulloa|first3=J. Ricardo|last4=Toril|first4=Elena Gonzalez|last5=Donati|first5=Edgardo R.|title=Physiologic Versatility and Growth Flexibility as the Main Characteristics of a Novel Thermoacidophilic Acidianus Strain Isolated from Copahue Geothermal Area in Argentina|journal=Environmental Microbiology|date=3 October 2012|volume=65|issue=2|pages=336–346|doi=10.1007/s00248-012-0129-4|pmid=23052926|s2cid=12798711|hdl=11336/4310|hdl-access=free}}

*{{cite journal|last1=Li|first1=Sen|last2=Yang|first2=Jie|title=System analysis of synonymous codon usage biases in archaeal virus genomes|journal=Journal of Theoretical Biology|date=21 August 2014|volume= 355|pages=128–129|doi=10.1016/j.jtbi.2014.03.022|pmid=24685889|pmc=7094158|bibcode=2014JThBi.355..128L}}
* {{ cite journal | author = Zillig W, Yeats S, Holz I, Bock A, Rettenberger M, Gropp F, Simon G | date = 1986 | title = Desulfurolobus ambivalens, gen. nov., sp. nov., an autotrophic archaebacterium facultatively oxidizing or reducing sulfur | journal = Syst. Appl. Microbiol. | volume = 8 | pages = 197&ndash;203 }}


===Scientific books===
===Scientific books===
⚫
* {{ cite book | last = Stetter | first = KO | date = 1989 | chapter = Order III. Sulfolobales ord. nov. Family Sulfolobaceae fam. nov. | title = Bergey's Manual of Systematic Bacteriology | volume = 3 | edition = 1st |editor = JT Staley |editor2 = MP Bryant |editor3 = N Pfennig |editor4 = JG Holt | pages = 169 | publisher = The Williams & Wilkins Co. | location = Baltimore}}


⚫
==External links==
⚫
* {{ cite book | last = Stetter | first = KO | date = 1989 | chapter = Order III. Sulfolobales ord. nov. Family Sulfolobaceae fam. nov. | title = Bergey's Manual of Systematic Bacteriology, Volume 3 | edition = 1st ed. |editor = JT Staley, MP Bryant, N Pfennig, and JG Holt, eds. | pages = p. 169 | publisher = The Williams & Wilkins Co. | location = Baltimore}}
*[http://bacdive.dsmz.de/index.php?search=Acidianus&submit=Search ''Acidianus'' at Bac''Dive'' - the Bacterial Diversity Metadatabase]


{{Archaea classification}}
===Scientific databases===
{{Taxonbar|from=Q2823329}}


[[Category:Archaea genera]]
{{Taxonomic references|taxon=Acidianus}}
[[Category:Thermoproteota]]


⚫
==External links==

{{Taxonomic links|microbe=yes|NCBI_taxID=12914|taxoname=Acidianus|LSPN_letter=a|LSPN_taxoname=acidianus}}


{{archaea-stub}}
{{archaea-stub}}

⚫
[[Category:Archaea genera]]

⚫
[[fr:Acidianus]]

Latest revision as of 16:27, 13 February 2024

Acidianus
Acidianus convivator cell showing extrusion of Acidianus two-tailed virus particles.
Scientific classification
Domain:
Archaea
Phylum:
Thermoproteota
Class:
Thermoprotei
Order:
Sulfolobales
Family:
Sulfolobaceae
Genus:
Acidianus

Segerer, Neuner, Kristjansson & Stetter 1986
Species
Synonyms
  • "Desulfurolobus" Zillig & Bock 1987
  • "Sulfosphaerellus" Zhong et al. 1982

In taxonomy, Acidianus is a genus of the Sulfolobaceae.[1]

Phylogeny[edit]

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN) [2] and National Center for Biotechnology Information (NCBI)[1]

16S rRNA based LTP_06_2022[3][4][5] 53 marker proteins based GTDB 08-RS214[6][7][8]
Acidianus
Acidianus

"Ca. A. copahuensis" Giaveno et al. 2013

"A. manzaensis" Yoshida et al. 2006

A. sulfidivorans Plumb et al. 2007

A. infernus Segerer et al. 1986

A. ambivalens (Zillig & Böck 1987) Fuchs et al. 1996

"A. hospitalis" Bettstetter et al. 2003

See also[edit]

References[edit]

  1. ^ a b Sayers; et al. "Acidianus". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 10 May 2023.
  2. ^ J.P. Euzéby. "Acidianus". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved 10 May 2023.
  3. ^ "The LTP". Retrieved 10 May 2023.
  4. ^ "LTP_all tree in newick format". Retrieved 10 May 2023.
  5. ^ "LTP_06_2022 Release Notes" (PDF). Retrieved 10 May 2023.
  6. ^ "GTDB release 08-RS214". Genome Taxonomy Database. Retrieved 10 May 2023.
  7. ^ "ar53_r214.sp_label". Genome Taxonomy Database. Retrieved 10 May 2023.
  8. ^ "Taxon History". Genome Taxonomy Database. Retrieved 10 May 2023.

Further reading[edit]

Scientific journals[edit]

Scientific books[edit]

  • Stetter, KO (1989). "Order III. Sulfolobales ord. nov. Family Sulfolobaceae fam. nov.". In JT Staley; MP Bryant; N Pfennig; JG Holt (eds.). Bergey's Manual of Systematic Bacteriology. Vol. 3 (1st ed.). Baltimore: The Williams & Wilkins Co. p. 169.

External links[edit]


Stub icon

This archaea-related article is a stub. You can help Wikipedia by expanding it.

Retrieved from "https://en.wikipedia.org/w/index.php?title=Acidianus&oldid=1206968551"