Hardy-Weinberg equilibrium
The Hardy-Weinberg balance (HWG) (after the mathematician G. H. Hardy and the doctor and genetic researcher Wilhelm Weinberg ) is a term used in population genetics .
To calculate this mathematical model, one assumes an ideal population that cannot be found in reality. This means that no evolution takes place, since no evolutionary factors take effect that could change the gene pool . In this case, for any genotype distribution of the parent generation, there is a genotype distribution of the first daughter generation which is dependent only on the allele frequencies and which no longer changes in the following generations. Mathematically, this so-called equilibrium is a fixed point of the function defined by the inheritance mechanism.
Despite its model character, the Hardy-Weinberg equilibrium is used to derive population-genetic aspects from the model to reality. This model can be applied realistically, especially with relatively large populations . The rule is also used to calculate the proportion of heterozygous individuals (here in the example: Aa) in dominant- recessive inheritance patterns, since heterozygous organisms cannot be phenotypically differentiated from homozygous dominant (here: AA) because the dominant allele prevails.
history
GH Hardy's contribution
The Mendel's laws were rediscovered in 1900, but they were questioned for several more years, because you still could find no statement on how this could be a stable successor generation. Udny Yule argued against its use in 1902, believing that the dominant alleles would have to spread through the population over time. The US-American William Ernest Castle showed in 1903 that the genotypic frequencies remained stable without selection . Karl Pearson , known today for his contributions to statistics, found an equilibrium point in 1903 at p = q = 0.5. The British geneticist Reginald Punnett , unable to refute Yule's reply, asked his cricket partner Godfrey Harold Hardy , a pure mathematician who actually despised applied mathematics . In 1908 Hardy published an article in which he explained the "very simple" problem (his words) in biologist terms.
Suppose that Aa is a pair of Mendelian characters, A being dominant, and that in any given generation the number of pure dominants ( AA ), heterozygotes ( Aa ), and pure recessives ( aa ) are as p: 2q: r. Finally, suppose that the numbers are fairly large, so that mating may be regarded as random, that the sexes are evenly distributed among the three varieties, and that all are equally fertile. A little mathematics of the multiplication-table type is enough to show that in the next generation the numbers will be as (p + q) ^{2} : 2 (p + q) (q + r) :( q + r) ^{2} , or as p _{1} : 2q _{1} : r _{1} , say.
The interesting question is - in what circumstances will this distribution be the same as that in the generation before? It is easy to see that the condition for this is q ^{2} = pr. And since q _{1 }^{2} = p _{1} r _{1} , whatever the values of p, q, and r may be, the distribution will in any case continue unchanged after the second generation.
"Let us assume that Aa is a pair of Mendelian characters, A is dominant, and that in a given generation the number of homozygous dominants ( AA ), heterozygotes ( Aa ) and pure recessives ( aa ) are as p: 2q: r behaves. Finally, suppose that the numbers are sufficiently large that the pairings can be viewed as random, that the gender ratio is evenly distributed between the 3 variants, and that all are equally fertile. A little math of the multiplication table type is enough to show that the following applies to the numbers in the next generation: (p + q) ^{2} : 2 (p + q) (q + r) :( q + r) ^{2} , or p _{1} : 2q _{1} : r _{1} .
The interesting question is: under what circumstances does the distribution remain the same as in the previous generation? It is easy to see that the condition for this is q ^{2} = pr. And since q _{1 }^{2} = p _{1} r _{1} , regardless of which values p, q, and r assume, it follows that the distribution will always remain the same after the second generation. "
Thus this principle was known in the English-speaking world as "Hardy's Law".
Wilhelm Weinberg's contribution
Also in 1908, the German doctor and genetics researcher Wilhelm Weinberg gave a scientific lecture in Stuttgart entitled “ About the evidence of heredity in humans ”. In it he stated:
“The relationship is quite different if one considers MENDEL's inheritance under the influence of panmixia. I am starting from the general assumption that originally there were m male and female pure representatives of type A and likewise n pure representatives of type B each. If these intersect at random, one obtains, symbolically applying the binomial theorem, as the composition of the daughter generation:
or if is
- .
If you now cross the male and female members of the 1st generation at random, you get the following frequency of the different cross combinations:
or the relative frequency is for
and the composition of the second daughter generation is again
- .
So, under the influence of panmixia, we get the same distribution of pure types and hybrids for each generation and thus the possibility of calculating for each generation how the Representation of these types represents. "
Weinberg's work remained completely unknown in the Anglo-Saxon region until the German émigré Curt Stern drew attention to Weinberg's work in 1943. Since then, the population genetic law has borne the names of both men. Castle's name, which recognized the principle early on, is rarely added, but its formulation was not identical.
Characteristics of an ideal population
- Very large number of individuals: The accidental loss of an individual or genetic drift practically does not change the frequency of the alleles, which would have a relatively large impact in a small population.
- Panmixie : All matings, including carriers of different genotypes , are equally likely and equally successful.
- There is no selection , so there are neither advantages nor disadvantages for the carriers of certain genes ( genotype ) that have a phenotypic effect.
- There are no mutations .
- There will be no increase or migration ( migration instead) that change the allele frequency.
The ideal population is a theoretical construct, since in reality at least one of the conditions, which are all evolutionary factors, is not fulfilled. Evolution always takes place when the above conditions do not apply.
Calculation formula for 2 alleles
In the case in which only two different alleles P and Q exist with the relative frequencies ("allele frequencies") p and q , the formula for the Hardy-Weinberg equilibrium is:
There are:
- : Allele frequency of allele
- : Allele frequency of allele
The notation p ^{2} + 2pq + q ^{2} = 1 is useful in a biological context. The following applies in the Hardy-Weinberg equilibrium:
- : Frequency of homozygotes with characteristic P
- : Frequency of homozygotes with characteristic Q
- : Frequency of heterozygotes (characteristics P and Q)
Since the homozygote and heterozygote frequencies are usually experimentally determinable quantities, the corresponding allele frequencies can be calculated from them. Conversely, knowing an allele frequency can also calculate the number of expected heterozygotes and homozygotes.
1st example: phenylketonuria
The Phenylketonuria is a metabolic disease with autosomal recessive inheritance. In Germany (approx. 80 million inhabitants) there are roughly 8,000 people affected. This gives the homozygote frequency :
With
and
follows
The following applies to the frequency of the heterozygotes :
Converted to the total population results in the absolute number of heterozygotes:
I.e. almost 1.6 million people (approx. 2% of the population, about one in 50 people) in Germany are heterozygous for the phenylketonuria allele that causes the disease.
With a very small value of p , one can say as a first approximation that q ≈ 1 and thus approximately 2pq ≈ 2p applies to the heterozygote frequency . In the example above, this estimate is 1.6 million.
2nd example: Huntington's disease
The Huntington's disease is an autosomal dominant inherited neurological disorder. Both the heterozygotes and the homozygotes are clinically ill. The incidence of the disease is given as 5: 100,000. The sick are composed of the homozygotes ( p ^{2} ) and the heterozygotes ( 2pq ) for the disease-causing allele p and the following applies: ^{}
With
you get:
Reformulation and square addition leads to:
The two solutions to this quadratic equation are:
- and
The second solution does not make sense in a biological context, since p must always be less than or equal to 1, and can be rejected. For q we get:
The homozygote frequency is thus:
That would correspond to one person to around 1.6 billion. In other words, it is very likely that all people suffering from Huntington's disease in Germany are heterozygous for the disease-causing allele. As a first approximation, 2pq ≈ 2p also applies here .
Generalization for more than 2 alleles
The Hardy-Weinberg formula can easily be generalized for the case of more than 2 alleles. The following describes the case of 3 different alleles P, Q, R with allele frequencies ( p q r ). Then:
There are:
- : Frequency of homozygotes related to characteristic P
- : Frequency of homozygotes related to characteristic Q
- : Frequency of homozygotes related to trait R
- : Frequency of heterozygotes related to traits P and Q
- : Frequency of heterozygotes related to the characteristics Q and R
- : Frequency of heterozygotes related to traits P and R
Generalized to n alleles A _{1} … A _{n} with the relative frequencies p _{1} ,…, p _{n} then applies in the Hardy-Weinberg equilibrium:
with the respective homozygote frequencies of feature A _{i} :
and the heterozygote frequencies (characteristics A _{i} and A _{j} ):
- .
Example: AB0 blood group system (3 alleles)
The alleles for blood groups A and B are codominant, while the allele for blood group 0 is recessive. If the frequencies of the genes for A, B and 0 in the gene pool are a, b and o (with a + b + o = 1), the following applies to the frequency of the blood groups (phenotypes):
- : Frequency of people with blood group A
- : Frequency of people with blood group B
- : Frequency of people with blood group AB
- : Frequency of people with blood group 0
The blood group frequencies observed in Germany are: blood group A 43%, blood group 0 41%, blood group B 11% and blood group AB 5%.
This results in the following relationships (numerical values rounded):
1. For the allele :
2. For the allele :
3. For the allele :
The values for the allele frequencies calculated from observed data correspond to a Hardy-Weinberg equilibrium:
Generalization for a polyploid set of chromosomes
The example calculations given above relate to a diploid set of chromosomes, such as B. exists in humans, in which alleles are always present twice (each chromosome is always present twice, the only exception being the sex chromosomes). However, many organisms have polyploid sets of chromosomes in which an allele is present more than twice. The Hardy-Weinberg formula can also be generalized to such cases.
Two alleles in a polyploid chromosome set
where x is the degree of ploidy (diploid: x = 2; triploid: x = 3; tetraploid: x = 4; etc.), and
- : Allele frequency of allele
- : Allele frequency of allele
For a triploid chromosome set we get:
genotype | frequency |
---|---|
For a tetraploid set of chromosomes we get:
genotype | frequency |
---|---|
More than two alleles in a polyploid chromosome set
In the most general case, a polyploid set of chromosomes with ploidy degree x and n different alleles results :
or.
with the “multi-indices” k = (k _{1} , k _{2} ,…, k _{n} ) and p ^{k} = p _{1 }^{k 1} p _{2 }^{k 2} ⋯ p _{n}^{ k n} .
See also
Web links
- Working material and calculations on population genetics ( Memento from September 27, 2007 in the Internet Archive ) (PDF file; 401 kB)
- Simulation of Hardy-Weinberg's law
swell
- ↑ George Udny Yule : Mendel's laws and their probable relation to intra-racial heredity. In: New Phytologist. Vol. 1, No. 9, 1902, pp. 193-207, doi : 10.1111 / j.1469-8137.1902.tb06590.x .
- ^ William E. Castle : The Laws of Heredity of Galton and Mendel, and Some Laws Governing Race Improvement by Selection. In: Proceedings of the American Academy of Arts and Sciences. Vol. 39, No. 8, 1903, pp. 223-242, doi : 10.2307 / 20021870 .
- ^ Godfrey H. Hardy: Mendelian proportions in a mixed population. In: Science . Vol. 28, No. 706, 1908, pp. 49-50, doi : 10.1126 / science.28.706.49 .
- ↑ Sic in the writing, here should actually be × on the left .
- ↑ Sic in the writing, here should actually be on the right .
- ^ Wilhelm Weinberg: About the proof of inheritance in humans. In: Annual books of the Association for Patriotic Natural History in Württemberg. Vol. 64, 1908, ISSN 0368-4717 , pp. 369-382, digitized .
- ^ Curt Stern : The Hardy-Weinberg law. In: Science. Vol. 97, No. 2510, 1943, pp. 137-138, doi : 10.1126 / science.97.2510.137 , PMID 17788516 .
- ↑ Blood groups & their distribution. Blood donation service of the Bavarian Red Cross, accessed on May 9, 2016 .