Methanobacteriaceae: Difference between revisions
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{{Short description|Family of archaea}} |
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{{Taxobox |
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{{Automatic taxobox |
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| color = darkgray |
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| taxon = Methanobacteriaceae |
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| authority = Barker 1956 |
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| domain = [[Archaea]] |
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| classis = [[Methanobacteria]] |
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| ordo = [[Methanobacteriales]] |
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| subdivision = |
| subdivision = |
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[[Methanobacterium]] |
* ''[[Methanobacterium]]'' |
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[[Methanobrevibacter]] |
* ''[[Methanobrevibacter]]'' |
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[[Methanosphaera]] |
* ''[[Methanosphaera]]'' |
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[[Methanothermobacter]] |
* ''[[Methanothermobacter]]'' |
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}} |
}} |
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'''Methanobacteriaceae''' are a [[family (biology)|family]] of [[archaea]]ns in the order [[Methanobacteriales]].<ref name=NCBI>{{cite web |author = Sayers|display-authors = etal| url=https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Undef&id=2159&lvl=3&lin=f&keep=1&srchmode=1&unlock |title=Methanobacteriaceae |access-date=23 February 2022|publisher=[[National Center for Biotechnology Information]] (NCBI) taxonomy database}}</ref> |
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In [[alpha taxonomy|taxonomy]], the '''Methanobacteriaceae''' are a [[family (biology)|family]] of the [[Methanobacteriales]]. |
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==Phylogeny== |
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The currently accepted taxonomy is based on the [[List of Prokaryotic names with Standing in Nomenclature]] (LPSN) <ref>{{cite web|author=J.P. Euzéby |url=https://lpsn.dsmz.de/family/methanobacteriaceae |title=Methanobacteriaceae |access-date=23 February 2022 |publisher=[[List of Prokaryotic names with Standing in Nomenclature]] (LPSN)}}</ref> and [[National Center for Biotechnology Information]] (NCBI).<ref name=NCBI /> |
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{| class="wikitable" |
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* [http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=2159 NCBI taxonomy page for Methanobacteriaceae] |
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* [http://tolweb.org/Methanobacteriaceae/ Tree of Life Methanobacteriaceae] |
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! colspan=1 | 16S rRNA based [[The All-Species Living Tree Project|LTP]]_06_2022<ref>{{cite web|title=The LTP |url=https://imedea.uib-csic.es/mmg/ltp/#LTP| access-date=10 May 2023}}</ref><ref>{{cite web|title=LTP_all tree in newick format| url=https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_all_06_2022.ntree |access-date=10 May 2023}}</ref><ref>{{cite web|title=LTP_06_2022 Release Notes| url=https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_06_2022_release_notes.pdf |access-date=10 May 2023}}</ref> |
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* [http://www.bacterio.cict.fr/m/methanobacteriaceae.html LSPN page for Methanobacteriaceae] |
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! colspan=1 | 53 marker proteins based [[Genome Taxonomy Database|GTDB]] 08-RS214<ref name="about">{{cite web |title=GTDB release 08-RS214 |url=https://gtdb.ecogenomic.org/about#4%7C |website=[[Genome Taxonomy Database]]|access-date=10 May 2023}}</ref><ref name="tree">{{cite web |title=ar53_r214.sp_label |url=https://data.gtdb.ecogenomic.org/releases/release214/214.0/auxillary_files/ar53_r214.sp_labels.tree |website=[[Genome Taxonomy Database]]|access-date=10 May 2023}}</ref><ref name="taxon_history">{{cite web |title=Taxon History |url=https://gtdb.ecogenomic.org/taxon_history/ |website=[[Genome Taxonomy Database]]|access-date=10 May 2023}}</ref> |
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| style="vertical-align:top| |
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{{Clade|style=font-size:90%; line-height:90% |
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|1={{clade |
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|1=''[[Methanothermobacter]]'' species-group 2 |
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|2={{clade |
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|1=''[[Methanothermobacter]]'' |
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|2={{clade |
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|1=''[[Methanobacterium]]'' species-group 2 |
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|2={{clade |
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|1=''[[Methanobacterium]]'' |
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|2={{clade |
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|1=''[[Methanosphaera]]'' |
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|2=''[[Methanobrevibacter]]'' |
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}} |
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}} |
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}} |
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}} |
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}} |
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}} |
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{{Clade|style=font-size:90%; line-height:90% |
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|1={{clade |
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|1={{clade |
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|label1=Methanothermobacteraceae_A |
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|1=''[[Methanothermobacter]]'' species-group 2 |
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}} |
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|2={{clade |
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|label1="Methanothermobacteraceae" |
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|1=''[[Methanothermobacter]]'' |
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|label2=Methanobacteriaceae |
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|2={{clade |
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|1={{clade |
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|1=''[[Methanobacterium alcaliphilum]]'' |
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|2=''[[Methanobrevibacter]]'' |
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}} |
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|2={{clade |
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|1=''[[Methanobacterium]]'' species-group 2 |
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|2={{clade |
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|1=''[[Methanosphaera]]'' |
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|2=''[[Methanobacterium]]'' |
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}} |
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}} |
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}} |
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}} |
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}} |
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}} |
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|} |
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==See also== |
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{{archaea-stub}} |
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* [[List of Archaea genera]] |
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==References== |
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{{Reflist|1}} |
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==External links== |
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{{Archaea classification}} |
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{{Taxonbar|from=Q6823582}} |
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{{Authority control}} |
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[[Category:Archaea families]] |
[[Category:Archaea taxonomic families]] |
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Latest revision as of 13:47, 31 January 2024
Methanobacteriaceae | |
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Scientific classification | |
Domain: | Archaea |
Kingdom: | Euryarchaeota |
Class: | Methanobacteria |
Order: | Methanobacteriales |
Family: | Methanobacteriaceae Barker 1956 |
Genera | |
Methanobacteriaceae are a family of archaeans in the order Methanobacteriales.[1]
Phylogeny[edit]
The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN) [2] and National Center for Biotechnology Information (NCBI).[1]
16S rRNA based LTP_06_2022[3][4][5] | 53 marker proteins based GTDB 08-RS214[6][7][8] | |||||||||||||||||||||||||||
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See also[edit]
References[edit]
- ^ a b Sayers; et al. "Methanobacteriaceae". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 23 February 2022.
- ^ J.P. Euzéby. "Methanobacteriaceae". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved 23 February 2022.
- ^ "The LTP". Retrieved 10 May 2023.
- ^ "LTP_all tree in newick format". Retrieved 10 May 2023.
- ^ "LTP_06_2022 Release Notes" (PDF). Retrieved 10 May 2023.
- ^ "GTDB release 08-RS214". Genome Taxonomy Database. Retrieved 10 May 2023.
- ^ "ar53_r214.sp_label". Genome Taxonomy Database. Retrieved 10 May 2023.
- ^ "Taxon History". Genome Taxonomy Database. Retrieved 10 May 2023.