Sodium bicarbonate cotransporter 3: Difference between revisions

SLC4A7
Identifiers
Aliases	SLC4A7, NBC2, NBC3, NBCN1, SBC2, SLC4A6, solute carrier family 4 member 7
External IDs	OMIM: 603353 MGI: 2443878 HomoloGene: 2680 GeneCards: SLC4A7
Gene location (Human)
Chr.	Chromosome 3 (human)
End	27,484,420 bp
Gene location (Mouse)
Chr.	Chromosome 14 (mouse)
End	14,799,940 bp
RNA expression pattern
	Top expressed in
	oocyte; ; duodenum; ; Achilles tendon; ; jejunal mucosa; ; secondary oocyte; ; lactiferous duct; ; sural nerve; ; frontal pole; ; Brodmann area 23; ; superficial temporal artery;
	Top expressed in
	duodenum; ; left colon; ; retina; ; olfactory epithelium; ; medial ganglionic eminence; ; islet of Langerhans; ; uterus; ; soleus muscle; ; spermatid; ; subiculum;
	More reference expression data
	; ; ; ;
	More reference expression data
Gene ontology
Molecular function	inorganic anion exchanger activity; symporter activity; anion transmembrane transporter activity; sodium:bicarbonate symporter activity; protein binding;
Cellular component	integral component of membrane; cell projection; membrane; plasma membrane; synapse; stereocilium; basolateral plasma membrane; apical plasma membrane; cytoplasmic vesicle; integral component of plasma membrane;
Biological process	sodium ion transport; anion transport; auditory receptor cell development; ion transport; inorganic anion transport; regulation of intracellular pH; bicarbonate transport; transmembrane transport; anion transmembrane transport;
	Sources:Amigo / QuickGO
Orthologs
	9497
	218756
	ENSG00000033867
	ENSMUSG00000021733
	Q9Y6M7
	Q8BTY2
NM_001258379; NM_001258380; NM_003615; NM_001321103; NM_001321104;
	NM_001321105; NM_001321106; NM_001321107; NM_001321108
	NM_001033270
NP_001245308; NP_001245309; NP_001308032; NP_001308033; NP_001308034;
	NP_001308035; NP_001308036; NP_001308037; NP_003606
	n/a
	Wikidata
View/Edit Human	View/Edit Mouse

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Latest revision as of 02:51, 23 December 2023

Sodium bicarbonate cotransporter 3 is a protein which in humans is encoded by the SLC4A7 gene.^[5]

References[edit]

^ ^a ^b ^c GRCh38: Ensembl release 89: ENSG00000033867 – Ensembl, May 2017
^ ^a ^b ^c GRCm38: Ensembl release 89: ENSMUSG00000021733 – Ensembl, May 2017
^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
^ "Entrez Gene: SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7".

Further reading[edit]

Ishibashi K, Sasaki S, Marumo F (1998). "Molecular cloning of a new sodium bicarbonate cotransporter cDNA from human retina". Biochem. Biophys. Res. Commun. 246 (2): 535–8. doi:10.1006/bbrc.1998.8658. PMID 9610397.
Pushkin A, Abuladze N, Lee I, et al. (1999). "Mapping of the human NBC3 (SLC4A7) gene to chromosome 3p22". Genomics. 57 (2): 321–2. doi:10.1006/geno.1999.5781. PMID 10198178.
Pushkin A, Abuladze N, Lee I, et al. (1999). "Cloning, tissue distribution, genomic organization, and functional characterization of NBC3, a new member of the sodium bicarbonate cotransporter family". J. Biol. Chem. 274 (23): 16569–75. doi:10.1074/jbc.274.23.16569. PMID 10347222.
Pushkin A, Yip KP, Clark I, et al. (2000). "NBC3 expression in rabbit collecting duct: colocalization with vacuolar H+-ATPase". Am. J. Physiol. 277 (6 Pt 2): F974–81. doi:10.1152/ajprenal.1999.277.6.F974. PMID 10600945. S2CID 4457223.
Park M, Ko SB, Choi JY, et al. (2003). "The cystic fibrosis transmembrane conductance regulator interacts with and regulates the activity of the HCO3- salvage transporter human Na+-HCO3- cotransport isoform 3". J. Biol. Chem. 277 (52): 50503–9. doi:10.1074/jbc.M201862200. PMID 12403779.
Loiselle FB, Jaschke P, Casey JR (2004). "Structural and functional characterization of the human NBC3 sodium/bicarbonate co-transporter carboxyl-terminal cytoplasmic domain". Mol. Membr. Biol. 20 (4): 307–17. doi:10.1080/0968768031000122520. PMID 14578046. S2CID 30980041.
Loiselle FB, Morgan PE, Alvarez BV, Casey JR (2004). "Regulation of the human NBC3 Na+/HCO3- cotransporter by carbonic anhydrase II and PKA". Am. J. Physiol., Cell Physiol. 286 (6): C1423–33. doi:10.1152/ajpcell.00382.2003. PMID 14736710. S2CID 16522705.
Brill LM, Salomon AR, Ficarro SB, et al. (2004). "Robust phosphoproteomic profiling of tyrosine phosphorylation sites from human T cells using immobilized metal affinity chromatography and tandem mass spectrometry". Anal. Chem. 76 (10): 2763–72. doi:10.1021/ac035352d. PMID 15144186.
Jin J, Smith FD, Stark C, et al. (2004). "Proteomic, functional, and domain-based analysis of in vivo 14-3-3 binding proteins involved in cytoskeletal regulation and cellular organization". Curr. Biol. 14 (16): 1436–50. doi:10.1016/j.cub.2004.07.051. PMID 15324660. S2CID 2371325.
Reiners J, van Wijk E, Märker T, et al. (2006). "Scaffold protein harmonin (USH1C) provides molecular links between Usher syndrome type 1 and type 2". Hum. Mol. Genet. 14 (24): 3933–43. doi:10.1093/hmg/ddi417. PMID 16301216.
Ewing RM, Chu P, Elisma F, et al. (2007). "Large-scale mapping of human protein–protein interactions by mass spectrometry". Mol. Syst. Biol. 3 (1): 89. doi:10.1038/msb4100134. PMC 1847948. PMID 17353931.

This membrane protein–related article is a stub. You can help Wikipedia by expanding it.

[refGRCh38Ensembl-1] GRCh38: Ensembl release 89: ENSG00000033867 – Ensembl, May 2017

[refGRCm38Ensembl-2] GRCm38: Ensembl release 89: ENSMUSG00000021733 – Ensembl, May 2017

[3] "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.

[4] "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.

[5] "Entrez Gene: SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7".

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@@ Line 1: / Line 1: @@
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+{{Short description|Protein-coding gene in the species Homo sapiens}}
-'''Solute carrier family 4, sodium bicarbonate cotransporter, member 7''', also known as '''SLC4A7''', is a [[human]] [[gene]].<ref>{{cite web | title = Entrez Gene: SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=9497| accessdate = }}</ref>
+{{Infobox_gene}}
+'''Sodium bicarbonate cotransporter 3''' is a [[protein]] which in humans is encoded by the ''SLC4A7'' [[gene]].<ref>{{cite web | title = Entrez Gene: SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7| url = https://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=9497}}</ref>
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 ==See also==
@@ Line 16: / Line 12: @@
 ==Further reading==
 {{refbegin | 2}}
+*{{cite journal  | vauthors=Ishibashi K, Sasaki S, Marumo F |title=Molecular cloning of a new sodium bicarbonate cotransporter cDNA from human retina. |journal=Biochem. Biophys. Res. Commun. |volume=246 |issue= 2 |pages= 535–8 |year= 1998 |pmid= 9610397 |doi= 10.1006/bbrc.1998.8658 }}
-{{PBB_Further_reading
+*{{cite journal   |vauthors=Pushkin A, Abuladze N, Lee I, etal |title=Mapping of the human NBC3 (SLC4A7) gene to chromosome 3p22. |journal=Genomics |volume=57 |issue= 2 |pages= 321–2 |year= 1999 |pmid= 10198178 |doi= 10.1006/geno.1999.5781 }}
-| citations =
-*{{cite journal  | author=Ishibashi K, Sasaki S, Marumo F |title=Molecular cloning of a new sodium bicarbonate cotransporter cDNA from human retina. |journal=Biochem. Biophys. Res. Commun. |volume=246 |issue= 2 |pages= 535–8 |year= 1998 |pmid= 9610397 |doi= 10.1006/bbrc.1998.8658 }}
+*{{cite journal   |vauthors=Pushkin A, Abuladze N, Lee I, etal |title=Cloning, tissue distribution, genomic organization, and functional characterization of NBC3, a new member of the sodium bicarbonate cotransporter family. |journal=J. Biol. Chem. |volume=274 |issue= 23 |pages= 16569–75 |year= 1999 |pmid= 10347222 |doi=10.1074/jbc.274.23.16569  |doi-access=free }}
-*{{cite journal  | author=Pushkin A, Abuladze N, Lee I, ''et al.'' |title=Mapping of the human NBC3 (SLC4A7) gene to chromosome 3p22. |journal=Genomics |volume=57 |issue= 2 |pages= 321–2 |year= 1999 |pmid= 10198178 |doi= 10.1006/geno.1999.5781 }}
+*{{cite journal   |vauthors=Pushkin A, Yip KP, Clark I, etal |title=NBC3 expression in rabbit collecting duct: colocalization with vacuolar H+-ATPase. |journal=Am. J. Physiol. |volume=277 |issue= 6 Pt 2 |pages= F974–81 |year= 2000 |pmid= 10600945 |doi=  10.1152/ajprenal.1999.277.6.F974|s2cid=4457223 }}
-*{{cite journal  | author=Pushkin A, Abuladze N, Lee I, ''et al.'' |title=Cloning, tissue distribution, genomic organization, and functional characterization of NBC3, a new member of the sodium bicarbonate cotransporter family. |journal=J. Biol. Chem. |volume=274 |issue= 23 |pages= 16569–75 |year= 1999 |pmid= 10347222 |doi=10.1074/jbc.274.23.16569  }}
+*{{cite journal   |vauthors=Park M, Ko SB, Choi JY, etal |title=The cystic fibrosis transmembrane conductance regulator interacts with and regulates the activity of the HCO3- salvage transporter human Na+-HCO3- cotransport isoform 3. |journal=J. Biol. Chem. |volume=277 |issue= 52 |pages= 50503–9 |year= 2003 |pmid= 12403779 |doi= 10.1074/jbc.M201862200 |doi-access= free }}
-*{{cite journal  | author=Pushkin A, Yip KP, Clark I, ''et al.'' |title=NBC3 expression in rabbit collecting duct: colocalization with vacuolar H+-ATPase. |journal=Am. J. Physiol. |volume=277 |issue= 6 Pt 2 |pages= F974–81 |year= 2000 |pmid= 10600945 |doi=  }}
+*{{cite journal  | vauthors=Loiselle FB, Jaschke P, Casey JR |title=Structural and functional characterization of the human NBC3 sodium/bicarbonate co-transporter carboxyl-terminal cytoplasmic domain. |journal=Mol. Membr. Biol. |volume=20 |issue= 4 |pages= 307–17 |year= 2004 |pmid= 14578046 |doi= 10.1080/0968768031000122520 |s2cid=30980041 }}
-*{{cite journal  | author=Park M, Ko SB, Choi JY, ''et al.'' |title=The cystic fibrosis transmembrane conductance regulator interacts with and regulates the activity of the HCO3- salvage transporter human Na+-HCO3- cotransport isoform 3. |journal=J. Biol. Chem. |volume=277 |issue= 52 |pages= 50503–9 |year= 2003 |pmid= 12403779 |doi= 10.1074/jbc.M201862200 }}
+*{{cite journal  | vauthors=Loiselle FB, Morgan PE, Alvarez BV, Casey JR |title=Regulation of the human NBC3 Na+/HCO3- cotransporter by carbonic anhydrase II and PKA. |journal=Am. J. Physiol., Cell Physiol. |volume=286 |issue= 6 |pages= C1423–33 |year= 2004 |pmid= 14736710 |doi= 10.1152/ajpcell.00382.2003 |s2cid=16522705 }}
-*{{cite journal  | author=Loiselle FB, Jaschke P, Casey JR |title=Structural and functional characterization of the human NBC3 sodium/bicarbonate co-transporter carboxyl-terminal cytoplasmic domain. |journal=Mol. Membr. Biol. |volume=20 |issue= 4 |pages= 307–17 |year= 2004 |pmid= 14578046 |doi= 10.1080/0968768031000122520 }}
+*{{cite journal   |vauthors=Brill LM, Salomon AR, Ficarro SB, etal |title=Robust phosphoproteomic profiling of tyrosine phosphorylation sites from human T cells using immobilized metal affinity chromatography and tandem mass spectrometry. |journal=Anal. Chem. |volume=76 |issue= 10 |pages= 2763–72 |year= 2004 |pmid= 15144186 |doi= 10.1021/ac035352d }}
-*{{cite journal  | author=Loiselle FB, Morgan PE, Alvarez BV, Casey JR |title=Regulation of the human NBC3 Na+/HCO3- cotransporter by carbonic anhydrase II and PKA. |journal=Am. J. Physiol., Cell Physiol. |volume=286 |issue= 6 |pages= C1423–33 |year= 2004 |pmid= 14736710 |doi= 10.1152/ajpcell.00382.2003 }}
+*{{cite journal   |vauthors=Jin J, Smith FD, Stark C, etal |title=Proteomic, functional, and domain-based analysis of in vivo 14-3-3 binding proteins involved in cytoskeletal regulation and cellular organization. |journal=Curr. Biol. |volume=14 |issue= 16 |pages= 1436–50 |year= 2004 |pmid= 15324660 |doi= 10.1016/j.cub.2004.07.051 |s2cid=2371325 |doi-access=free }}
-*{{cite journal  | author=Brill LM, Salomon AR, Ficarro SB, ''et al.'' |title=Robust phosphoproteomic profiling of tyrosine phosphorylation sites from human T cells using immobilized metal affinity chromatography and tandem mass spectrometry. |journal=Anal. Chem. |volume=76 |issue= 10 |pages= 2763–72 |year= 2004 |pmid= 15144186 |doi= 10.1021/ac035352d }}
+*{{cite journal   |vauthors=Reiners J, van Wijk E, Märker T, etal |title=Scaffold protein harmonin (USH1C) provides molecular links between Usher syndrome type 1 and type 2. |journal=Hum. Mol. Genet. |volume=14 |issue= 24 |pages= 3933–43 |year= 2006 |pmid= 16301216 |doi= 10.1093/hmg/ddi417 |doi-access= free }}
-*{{cite journal  | author=Jin J, Smith FD, Stark C, ''et al.'' |title=Proteomic, functional, and domain-based analysis of in vivo 14-3-3 binding proteins involved in cytoskeletal regulation and cellular organization. |journal=Curr. Biol. |volume=14 |issue= 16 |pages= 1436–50 |year= 2004 |pmid= 15324660 |doi= 10.1016/j.cub.2004.07.051 }}
+*{{cite journal   |vauthors=Ewing RM, Chu P, Elisma F, etal |title=Large-scale mapping of human protein–protein interactions by mass spectrometry |journal=Mol. Syst. Biol. |volume=3 |issue=  1|pages= 89 |year= 2007 |pmid= 17353931 |doi= 10.1038/msb4100134  | pmc=1847948 }}
-*{{cite journal  | author=Reiners J, van Wijk E, Märker T, ''et al.'' |title=Scaffold protein harmonin (USH1C) provides molecular links between Usher syndrome type 1 and type 2. |journal=Hum. Mol. Genet. |volume=14 |issue= 24 |pages= 3933–43 |year= 2006 |pmid= 16301216 |doi= 10.1093/hmg/ddi417 }}
-*{{cite journal  | author=Ewing RM, Chu P, Elisma F, ''et al.'' |title=Large-scale mapping of human protein-protein interactions by mass spectrometry. |journal=Mol. Syst. Biol. |volume=3 |issue=  1|pages= 89 |year= 2007 |pmid= 17353931 |doi= 10.1038/msb4100134  | pmc=1847948 }}
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 [[Category:Solute carrier family]]
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Latest revision as of 02:51, 23 December 2023

See also[edit]

References[edit]

Further reading[edit]