Proton-coupled amino acid transporter 1: Difference between revisions

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{{Short description|Protein-coding gene in the species Homo sapiens}}
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{{Infobox_gene}}
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'''Proton-coupled amino acid transporter 1''' is a [[protein]] that in humans is encoded by the ''SLC36A1'' [[gene]].<ref name="pmid11959859">{{cite journal | vauthors = Boll M, Foltz M, Rubio-Aliaga I, Kottra G, Daniel H | title = Functional characterization of two novel mammalian electrogenic proton-dependent amino acid cotransporters | journal = J Biol Chem | volume = 277 | issue = 25 | pages = 22966–73 |date=Jun 2002 | pmid = 11959859 | doi = 10.1074/jbc.M200374200 | doi-access = free }}</ref><ref name="pmid11390972">{{cite journal | vauthors = Sagne C, Agulhon C, Ravassard P, Darmon M, Hamon M, El Mestikawy S, Gasnier B, Giros B | title = Identification and characterization of a lysosomal transporter for small neutral amino acids | journal = Proc Natl Acad Sci U S A | volume = 98 | issue = 13 | pages = 7206–11 |date=Jun 2001 | pmid = 11390972 | pmc = 34647 | doi = 10.1073/pnas.121183498 | bibcode = 2001PNAS...98.7206S | doi-access = free }}</ref><ref name="entrez">{{cite web | title = Entrez Gene: SLC36A1 solute carrier family 36 (proton/amino acid symporter), member 1| url = https://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=206358}}</ref>
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This gene encodes a member of the eukaryote-specific [[AAAP Family|amino acid/auxin permease (AAAP)]] 1 transporter family. The encoded protein functions as a proton-dependent, small amino acid transporter. This gene is clustered with related family members on chromosome 5q33.1.<ref name="entrez"/>
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{{GNF_Protein_box
| image =
| image_source =
| PDB =
| Name = Solute carrier family 36 (proton/amino acid symporter), member 1
| HGNCid = 18761
| Symbol = SLC36A1
| AltSymbols =; PAT1; LYAAT1; TRAMD3
| OMIM = 606561
| ECnumber =
| Homologene = 70571
| MGIid = 2445299
| GeneAtlas_image1 = PBB_GE_SLC36A1_213119_at_tn.png
| GeneAtlas_image2 = PBB_GE_SLC36A1_gnf1h01641_at_tn.png
| GeneAtlas_image3 = PBB_GE_SLC36A1_gnf1h01642_at_tn.png
| Function = {{GNF_GO|id=GO:0005280 |text = hydrogen:amino acid symporter activity}} {{GNF_GO|id=GO:0015171 |text = amino acid transmembrane transporter activity}} {{GNF_GO|id=GO:0015180 |text = L-alanine transmembrane transporter activity}} {{GNF_GO|id=GO:0015187 |text = glycine transmembrane transporter activity}} {{GNF_GO|id=GO:0015193 |text = L-proline transmembrane transporter activity}} {{GNF_GO|id=GO:0015293 |text = symporter activity}}
| Component = {{GNF_GO|id=GO:0005783 |text = endoplasmic reticulum}} {{GNF_GO|id=GO:0016020 |text = membrane}} {{GNF_GO|id=GO:0016021 |text = integral to membrane}}
| Process = {{GNF_GO|id=GO:0006810 |text = transport}} {{GNF_GO|id=GO:0006865 |text = amino acid transport}} {{GNF_GO|id=GO:0015808 |text = L-alanine transport}} {{GNF_GO|id=GO:0015816 |text = glycine transport}} {{GNF_GO|id=GO:0015824 |text = proline transport}} {{GNF_GO|id=GO:0015992 |text = proton transport}}
| Orthologs = {{GNF_Ortholog_box
| Hs_EntrezGene = 206358
| Hs_Ensembl = ENSG00000123643
| Hs_RefseqProtein = NP_510968
| Hs_RefseqmRNA = NM_078483
| Hs_GenLoc_db =
| Hs_GenLoc_chr = 5
| Hs_GenLoc_start = 150807356
| Hs_GenLoc_end = 150852132
| Hs_Uniprot = Q7Z2H8
| Mm_EntrezGene = 215335
| Mm_Ensembl = ENSMUSG00000020261
| Mm_RefseqmRNA = NM_153139
| Mm_RefseqProtein = NP_694779
| Mm_GenLoc_db =
| Mm_GenLoc_chr = 11
| Mm_GenLoc_start = 55047793
| Mm_GenLoc_end = 55077329
| Mm_Uniprot = Q5F227
}}
}}
'''Solute carrier family 36 (proton/amino acid symporter), member 1''', also known as '''SLC36A1''', is a human [[gene]].<ref name="entrez">{{cite web | title = Entrez Gene: SLC36A1 solute carrier family 36 (proton/amino acid symporter), member 1| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=206358| accessdate = }}</ref>

<!-- The PBB_Summary template is automatically maintained by Protein Box Bot. See Template:PBB_Controls to Stop updates. -->
{{PBB_Summary
| section_title =
| summary_text = This gene encodes a member of the eukaryote-specific amino acid/auxin permease (AAAP) 1 transporter family. The encoded protein functions as a proton-dependent, small amino acid transporter. This gene is clustered with related family members on chromosome 5q33.1.<ref name="entrez">{{cite web | title = Entrez Gene: SLC36A1 solute carrier family 36 (proton/amino acid symporter), member 1| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=206358| accessdate = }}</ref>
}}


==See also==
==See also==
* [[Solute carrier family]]
* [[Solute carrier family]]
* [[Proton coupled amino acid transporter]]

==References==
==References==
{{reflist}}
{{reflist}}
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==Further reading==
==Further reading==
{{refbegin | 2}}
{{refbegin | 2}}
*{{cite journal | vauthors=Hartley JL, Temple GF, Brasch MA |title=DNA Cloning Using In Vitro Site-Specific Recombination |journal=Genome Res. |volume=10 |issue= 11 |pages= 1788–95 |year= 2001 |pmid= 11076863 |doi=10.1101/gr.143000 | pmc=310948 }}
{{PBB_Further_reading
*{{cite journal |vauthors=Wiemann S, Weil B, Wellenreuther R, etal |title=Toward a Catalog of Human Genes and Proteins: Sequencing and Analysis of 500 Novel Complete Protein Coding Human cDNAs |journal=Genome Res. |volume=11 |issue= 3 |pages= 422–35 |year= 2001 |pmid= 11230166 |doi= 10.1101/gr.GR1547R | pmc=311072 }}
| citations =
*{{cite journal | author=Hartley JL, Temple GF, Brasch MA |title=DNA cloning using in vitro site-specific recombination. |journal=Genome Res. |volume=10 |issue= 11 |pages= 1788-95 |year= 2001 |pmid= 11076863 |doi= }}
*{{cite journal |vauthors=Simpson JC, Wellenreuther R, Poustka A, etal |title=Systematic subcellular localization of novel proteins identified by large-scale cDNA sequencing |journal=EMBO Rep. |volume=1 |issue= 3 |pages= 287–92 |year= 2001 |pmid= 11256614 |doi= 10.1093/embo-reports/kvd058 | pmc=1083732 }}
*{{cite journal | author=Wiemann S, Weil B, Wellenreuther R, ''et al.'' |title=Toward a catalog of human genes and proteins: sequencing and analysis of 500 novel complete protein coding human cDNAs. |journal=Genome Res. |volume=11 |issue= 3 |pages= 422-35 |year= 2001 |pmid= 11230166 |doi= 10.1101/gr.154701 }}
*{{cite journal |vauthors=Chen Z, Fei YJ, Anderson CM, etal |title=Structure, function and immunolocalization of a proton-coupled amino acid transporter (hPAT1) in the human intestinal cell line Caco-2 |journal=J. Physiol. |volume=546 |issue= Pt 2 |pages= 349–61 |year= 2003 |pmid= 12527723 |doi=10.1113/jphysiol.2002.026500 | pmc=2342508 }}
*{{cite journal | author=Simpson JC, Wellenreuther R, Poustka A, ''et al.'' |title=Systematic subcellular localization of novel proteins identified by large-scale cDNA sequencing. |journal=EMBO Rep. |volume=1 |issue= 3 |pages= 287-92 |year= 2001 |pmid= 11256614 |doi= 10.1093/embo-reports/kvd058 }}
*{{cite journal |vauthors=Wreden CC, Johnson J, Tran C, etal |title=The H+-coupled electrogenic lysosomal amino acid transporter LYAAT1 localizes to the axon and plasma membrane of hippocampal neurons |journal=J. Neurosci. |volume=23 |issue= 4 |pages= 1265–75 |year= 2003 |pmid= 12598615 |doi= 10.1523/JNEUROSCI.23-04-01265.2003|pmc= 6742289 }}
*{{cite journal | author=Sagné C, Agulhon C, Ravassard P, ''et al.'' |title=Identification and characterization of a lysosomal transporter for small neutral amino acids. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=98 |issue= 13 |pages= 7206-11 |year= 2001 |pmid= 11390972 |doi= 10.1073/pnas.121183498 }}
*{{cite journal | vauthors=Boll M, Foltz M, Rubio-Aliaga I, Daniel H |title=A cluster of proton/amino acid transporter genes in the human and mouse genomes |journal=Genomics |volume=82 |issue= 1 |pages= 47–56 |year= 2004 |pmid= 12809675 |doi=10.1016/S0888-7543(03)00099-5 }}
*{{cite journal | author=Boll M, Foltz M, Rubio-Aliaga I, ''et al.'' |title=Functional characterization of two novel mammalian electrogenic proton-dependent amino acid cotransporters. |journal=J. Biol. Chem. |volume=277 |issue= 25 |pages= 22966-73 |year= 2002 |pmid= 11959859 |doi= 10.1074/jbc.M200374200 }}
*{{cite journal |vauthors=Ota T, Suzuki Y, Nishikawa T, etal |title=Complete sequencing and characterization of 21,243 full-length human cDNAs |journal=Nat. Genet. |volume=36 |issue= 1 |pages= 40–5 |year= 2004 |pmid= 14702039 |doi= 10.1038/ng1285 |doi-access= free }}
*{{cite journal | author=Chen Z, Fei YJ, Anderson CM, ''et al.'' |title=Structure, function and immunolocalization of a proton-coupled amino acid transporter (hPAT1) in the human intestinal cell line Caco-2. |journal=J. Physiol. (Lond.) |volume=546 |issue= Pt 2 |pages= 349-61 |year= 2003 |pmid= 12527723 |doi= }}
*{{cite journal | vauthors=Bermingham JR, Pennington J |title=Organization and expression of the SLC36 cluster of amino acid transporter genes |journal=Mamm. Genome |volume=15 |issue= 2 |pages= 114–25 |year= 2004 |pmid= 15058382 |doi=10.1007/s00335-003-2319-3 |s2cid=21418124 }}
*{{cite journal | author=Wreden CC, Johnson J, Tran C, ''et al.'' |title=The H+-coupled electrogenic lysosomal amino acid transporter LYAAT1 localizes to the axon and plasma membrane of hippocampal neurons. |journal=J. Neurosci. |volume=23 |issue= 4 |pages= 1265-75 |year= 2003 |pmid= 12598615 |doi= }}
*{{cite journal |vauthors=Wiemann S, Arlt D, Huber W, etal |title=From ORFeome to Biology: A Functional Genomics Pipeline |journal=Genome Res. |volume=14 |issue= 10B |pages= 2136–44 |year= 2004 |pmid= 15489336 |doi= 10.1101/gr.2576704 | pmc=528930 }}
*{{cite journal | author=Boll M, Foltz M, Rubio-Aliaga I, Daniel H |title=A cluster of proton/amino acid transporter genes in the human and mouse genomes. |journal=Genomics |volume=82 |issue= 1 |pages= 47-56 |year= 2004 |pmid= 12809675 |doi= }}
*{{cite journal |vauthors=Anderson CM, Grenade DS, Boll M, etal |title=H+/amino acid transporter 1 (PAT1) is the imino acid carrier: An intestinal nutrient/drug transporter in human and rat |journal=Gastroenterology |volume=127 |issue= 5 |pages= 1410–22 |year= 2004 |pmid= 15521011 |doi=10.1053/j.gastro.2004.08.017 |doi-access=free }}
*{{cite journal | author=Ota T, Suzuki Y, Nishikawa T, ''et al.'' |title=Complete sequencing and characterization of 21,243 full-length human cDNAs. |journal=Nat. Genet. |volume=36 |issue= 1 |pages= 40-5 |year= 2004 |pmid= 14702039 |doi= 10.1038/ng1285 }}
*{{cite journal | vauthors=Anderson CM, Thwaites DT |title=Indirect regulation of the intestinal H+-coupled amino acid transporter hPAT1 (SLC36A1) |journal=J. Cell. Physiol. |volume=204 |issue= 2 |pages= 604–13 |year= 2005 |pmid= 15754324 |doi= 10.1002/jcp.20337 |s2cid=31443973 }}
*{{cite journal | author=Bermingham JR, Pennington J |title=Organization and expression of the SLC36 cluster of amino acid transporter genes. |journal=Mamm. Genome |volume=15 |issue= 2 |pages= 114-25 |year= 2004 |pmid= 15058382 |doi= }}
*{{cite journal |vauthors=Abbot EL, Grenade DS, Kennedy DJ, etal |title=Vigabatrin transport across the human intestinal epithelial (Caco-2) brush-border membrane is via the H+-coupled amino-acid transporter hPAT1 |journal=Br. J. Pharmacol. |volume=147 |issue= 3 |pages= 298–306 |year= 2006 |pmid= 16331283 |doi= 10.1038/sj.bjp.0706557 | pmc=1751303 }}
*{{cite journal | author=Wiemann S, Arlt D, Huber W, ''et al.'' |title=From ORFeome to biology: a functional genomics pipeline. |journal=Genome Res. |volume=14 |issue= 10B |pages= 2136-44 |year= 2004 |pmid= 15489336 |doi= 10.1101/gr.2576704 }}
*{{cite journal |vauthors=Mehrle A, Rosenfelder H, Schupp I, etal |title=The LIFEdb database in 2006 |journal=Nucleic Acids Res. |volume=34 |issue= Database issue |pages= D415–8 |year= 2006 |pmid= 16381901 |doi= 10.1093/nar/gkj139 | pmc=1347501 }}
*{{cite journal | author=Anderson CM, Grenade DS, Boll M, ''et al.'' |title=H+/amino acid transporter 1 (PAT1) is the imino acid carrier: An intestinal nutrient/drug transporter in human and rat. |journal=Gastroenterology |volume=127 |issue= 5 |pages= 1410-22 |year= 2004 |pmid= 15521011 |doi= }}
*{{cite journal |vauthors=Kuan YH, Gruebl T, Soba P, etal |title=PAT1a modulates intracellular transport and processing of amyloid precursor protein (APP), APLP1, and APLP2 |journal=J. Biol. Chem. |volume=281 |issue= 52 |pages= 40114–23 |year= 2007 |pmid= 17050537 |doi= 10.1074/jbc.M605407200 |doi-access= free }}
*{{cite journal | author=Anderson CM, Thwaites DT |title=Indirect regulation of the intestinal H+-coupled amino acid transporter hPAT1 (SLC36A1). |journal=J. Cell. Physiol. |volume=204 |issue= 2 |pages= 604-13 |year= 2005 |pmid= 15754324 |doi= 10.1002/jcp.20337 }}
*{{cite journal | author=Abbot EL, Grenade DS, Kennedy DJ, ''et al.'' |title=Vigabatrin transport across the human intestinal epithelial (Caco-2) brush-border membrane is via the H+ -coupled amino-acid transporter hPAT1. |journal=Br. J. Pharmacol. |volume=147 |issue= 3 |pages= 298-306 |year= 2006 |pmid= 16331283 |doi= 10.1038/sj.bjp.0706557 }}
*{{cite journal | author=Mehrle A, Rosenfelder H, Schupp I, ''et al.'' |title=The LIFEdb database in 2006. |journal=Nucleic Acids Res. |volume=34 |issue= Database issue |pages= D415-8 |year= 2006 |pmid= 16381901 |doi= 10.1093/nar/gkj139 }}
*{{cite journal | author=Kuan YH, Gruebl T, Soba P, ''et al.'' |title=PAT1a modulates intracellular transport and processing of amyloid precursor protein (APP), APLP1, and APLP2. |journal=J. Biol. Chem. |volume=281 |issue= 52 |pages= 40114-23 |year= 2007 |pmid= 17050537 |doi= 10.1074/jbc.M605407200 }}
}}
{{refend}}
{{refend}}


{{membrane-protein-stub}}
{{NLM content}}
{{NLM content}}
{{Membrane transport proteins}}
{{Membrane transport proteins}}

[[Category:Solute carrier family]]
[[Category:Solute carrier family]]


{{membrane-protein-stub}}

Latest revision as of 03:17, 1 January 2024

SLC36A1
Identifiers
AliasesSLC36A1, Dct1, LYAAT1, PAT1, TRAMD3, solute carrier family 36 member 1
External IDsOMIM: 606561; MGI: 2445299; HomoloGene: 121860; GeneCards: SLC36A1; OMA:SLC36A1 - orthologs
Orthologs
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

NM_001308150
NM_001308151
NM_078483
NM_001349740

NM_153139

RefSeq (protein)

NP_001295079
NP_001295080
NP_510968
NP_001336669

NP_694779

Location (UCSC)Chr 5: 151.44 – 151.49 MbChr 11: 55.1 – 55.13 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Proton-coupled amino acid transporter 1 is a protein that in humans is encoded by the SLC36A1 gene.[5][6][7]

This gene encodes a member of the eukaryote-specific amino acid/auxin permease (AAAP) 1 transporter family. The encoded protein functions as a proton-dependent, small amino acid transporter. This gene is clustered with related family members on chromosome 5q33.1.[7]

See also[edit]

References[edit]

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000123643Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000020261Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Boll M, Foltz M, Rubio-Aliaga I, Kottra G, Daniel H (Jun 2002). "Functional characterization of two novel mammalian electrogenic proton-dependent amino acid cotransporters". J Biol Chem. 277 (25): 22966–73. doi:10.1074/jbc.M200374200. PMID 11959859.
  6. ^ Sagne C, Agulhon C, Ravassard P, Darmon M, Hamon M, El Mestikawy S, Gasnier B, Giros B (Jun 2001). "Identification and characterization of a lysosomal transporter for small neutral amino acids". Proc Natl Acad Sci U S A. 98 (13): 7206–11. Bibcode:2001PNAS...98.7206S. doi:10.1073/pnas.121183498. PMC 34647. PMID 11390972.
  7. ^ a b "Entrez Gene: SLC36A1 solute carrier family 36 (proton/amino acid symporter), member 1".

Further reading[edit]

This article incorporates text from the United States National Library of Medicine, which is in the public domain.