Kitasatospora: Difference between revisions
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{{Short description|Genus of bacteria}} |
{{Short description|Genus of bacteria}} |
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{{Italic title}} |
{{Italic title}} |
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{{Automatic taxobox |
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{{Taxobox |
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| taxon = Kitasatospora |
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| image = Kitasatospora setae NRRL B-16185 (Type Strain).jpg |
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| regnum = [[Bacteria]] |
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| image_caption = ''[[Kitasatospora setae]]'' (type strain) |
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| phylum = "[[Actinobacteria]]" |
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| authority = corrig. [[Satoshi Omura|Ōmura]] et al. 1983 |
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| classis = [[Actinobacteria (class)|Actinobacteria]] |
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| type_species = ''Kitasatospora setae'' |
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| ordo = [[Streptomycetales]] |
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| type_species_authority = corrig. Ōmura et al. 1983<ref name=LPSN></ref> |
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| familia = [[Streptomycetaceae]] |
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| subdivision_ranks = [[Species]] |
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| genus = '''''Kitasatospora''''' |
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| subdivision = See text. |
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| genus_authority = corrig. [[Satoshi Omura|Ōmura]] ''et al''. 1983 |
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| synonyms = |
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| type_species = ''[[Kitasatospora setae]]'' |
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* ''Kitasatosporia'' <small>(sic)</small> |
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| type_species_authority = corrig. Ōmura ''et al''. 1983<ref>[https://lpsn.dsmz.de/genus/kitasatospora ''Kitasatospora'' on lpsn.dsmz.de]</ref> |
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| subdivision_ranks = Species |
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| subdivision = see text |
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}} |
}} |
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'''''Kitasatospora''''' is an Actinobacteria genus in the family [[Streptomycetaceae]]. The genus name comes from [[Shibasaburo Kitasato]], a Japanese bacteriologist. |
'''''Kitasatospora''''' is an Actinobacteria genus in the family [[Streptomycetaceae]]. The genus name comes from [[Shibasaburo Kitasato]], a Japanese bacteriologist. |
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==Phylogeny== |
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The currently accepted taxonomy is based on the [[List of Prokaryotic names with Standing in Nomenclature]] (LPSN)<ref name=LPSN>{{cite web| author=A.C. Parte| url=https://lpsn.dsmz.de/genus/Kitasatospora| title=Kitasatospora| access-date=2023-09-09| publisher=[[List of Prokaryotic names with Standing in Nomenclature]] (LPSN)| display-authors=et al.}}</ref> and [[National Center for Biotechnology Information]] (NCBI)<ref name=NCBI>{{cite web| author=Sayers| url=https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Undef&id=2063&lvl=3&keep=1&srchmode=1&unlock| title=Kitasatospora| access-date=2023-09-09| publisher=[[National Center for Biotechnology Information]] (NCBI) taxonomy database| display-authors=et al.}}</ref> |
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{| class="wikitable" |
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|- |
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! colspan=1 | 16S rRNA based [[The All-Species Living Tree Project|LTP]]_08_2023<ref name=LTP>{{cite web|title=The LTP |url=https://imedea.uib-csic.es/mmg/ltp/#LTP| access-date=20 November 2023}}</ref><ref>{{cite web|title=LTP_all tree in newick format|url=https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_all_08_2023.ntree |access-date=20 November 2023}}</ref><ref>{{cite web|title=LTP_08_2023 Release Notes| url=https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_08_2023_release_notes.pdf |access-date=20 November 2023}}</ref> |
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! colspan=1 | 120 marker proteins based [[Genome Taxonomy Database|GTDB]] 08-RS214<ref name="about">{{cite web |title=GTDB release 08-RS214 |url=https://gtdb.ecogenomic.org/about#4%7C |website=[[Genome Taxonomy Database]]|access-date=10 May 2023}}</ref><ref name="tree">{{cite web |title=bac120_r214.sp_label |url=https://data.gtdb.ecogenomic.org/releases/release214/214.0/auxillary_files/bac120_r214.sp_labels.tree |website=[[Genome Taxonomy Database]]|access-date=10 May 2023}}</ref><ref name="taxon_history">{{cite web |title=Taxon History |url=https://gtdb.ecogenomic.org/taxon_history/ |website=[[Genome Taxonomy Database]]|access-date=10 May 2023}}</ref> |
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|- |
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| style="vertical-align:top| |
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{{Clade | style=font-size:90%;line-height:80% |
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|label1=''Kitasatospora'' |
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|1={{clade |
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|1={{clade |
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|1={{clade |
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|1=''K. acidiphila'' <small>Kim et al. 2020</small> |
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|2=''K. humi'' <small>Klaysubun et al. 2022 validly published under the ICNP</small> |
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}} |
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|2={{clade |
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|1=''K. paranensis'' <small>Groth et al. 2004</small> |
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|2=''K. terrestris'' <small>Groth et al. 2004</small> |
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}} |
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}} |
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|2={{clade |
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|1={{clade |
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|1=''K. kifunensis'' <small>(Nakagaito et al. 1993) Groth et al. 2003</small> |
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|2={{clade |
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|1=''K. azatica'' <small>corrig. (Nakagaito et al. 1993) Zhang et al. 1997</small> |
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|2=''K. nipponensis'' <small>Groth et al. 2004</small> |
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}} |
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}} |
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|2={{clade |
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|1={{clade |
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|1={{clade |
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|1=''K. atroaurantiaca'' <small>(Nakagaito et al. 1993) Li et al. 2009</small> |
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|2={{clade |
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|1=''K. gansuensis'' <small>Groth et al. 2004</small> |
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|2={{clade |
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|1=''K. kazusensis'' <small>corrig. Li et al. 2009</small> |
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|2=''K. mediocidica'' <small>corrig. Labeda 1988</small> |
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}} |
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}} |
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}} |
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|2={{clade |
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|1=''K. cystarginea'' <small>corrig. Kusakabe and Isono 1992</small> |
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|2={{clade |
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|1={{clade |
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|1=''K. saccharophila'' <small>Li et al. 2009</small> |
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|2=''K. setae'' <small>corrig. Ōmura et al. 1983</small> |
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}} |
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|2={{clade |
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|1=''K. paracochleata'' <small>corrig. (Nakagaito et al. 1993) Zhang et al. 1997</small> |
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|2={{clade |
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|1=''K. griseola'' <small>corrig. Takahashi et al. 1985</small> |
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|2={{clade |
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|1=''K. cheerisanensis'' <small>Chung et al. 1999</small> |
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|2={{clade |
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|1=''K. phosalacinea'' <small>corrig. Takahashi et al. 1985</small> |
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|2={{clade |
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|1=''K. cineracea'' <small>Tajima et al. 2001</small> |
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|2=''K. niigatensis'' <small>Tajima et al. 2001</small> |
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}} |
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}} |
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}} |
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}} |
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}} |
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}} |
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}} |
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}} |
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|2={{clade |
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|1=''[[Kitasatospora aburaviensis|K. aburaviensis]]'' <small>(Nishimura et al. 1957) Labeda et al. 2017</small> |
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|2={{clade |
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|1={{clade |
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|1={{clade |
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|1=''[[Kitasatospora purpeofusca|K. purpeofusca]]'' <small>(Yamaguchi and Saburi 1955) Labeda et al. 2017</small> |
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|2={{clade |
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|1=''[[Kitasatospora herbaricolor|K. herbaricolor]]'' <small>(Kawato and Shinobu 1959) Labeda et al. 2017</small> |
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|2=''[[Kitasatospora indigofera|K. indigofera]]'' <small>(Shinobu and Kawato 1960) Nouioui et al. 2018</small> |
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}} |
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}} |
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|2={{clade |
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|1=''[[Streptomyces lactacystinicus]]'' <small>Také et al. 2017</small> |
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|2={{clade |
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|1=''[[Kitasatospora xanthocidica|K. xanthocidica]]'' <small>(Asahi et al. 1966) Nouioui et al. 2018</small> |
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|2={{clade |
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|1=''Streptomyces purpureus'' <small>(Matsumae & Hata 1968) Goodfellow et al. 1986</small> |
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|2="''K. fumigata''" <small>(Frommer 1959) Labeda et al. 2017</small> |
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}} |
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}} |
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}} |
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}} |
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|2={{clade |
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|1={{clade |
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|1=''K. putterlickiae'' <small>Groth et al. 2003</small> |
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|2=''K. sampliensis'' <small>Mayilraj et al. 2006</small> |
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}} |
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|2={{clade |
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|1={{clade |
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|1=''[[Kitasatospora aureofaciens|K. aureofaciens]]'' <small>(Duggar 1948) Labeda et al. 2017</small> |
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|2=''K. psammotica'' <small>(Virgilio & Hengeller 1960) Labeda et al. 2017</small> |
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}} |
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|2={{clade |
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|1=''K. arboriphila'' <small>Groth et al. 2004</small> |
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|2= ''K. viridis'' <small>Liu et al. 2005</small> |
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}} |
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}} |
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}} |
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}} |
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}} |
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}} |
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}} |
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}} |
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}} |
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| |
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{{Clade | style=font-size:90%;line-height:90% |
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|label1=''Kitasatospora'' |
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|1={{clade |
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|1={{clade |
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|1=''[[Kitasatospora herbaricolor|K. herbaricolor]]'' |
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|2=''[[Kitasatospora indigofera|K. indigofera]]'' |
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}} |
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|2={{clade |
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|1={{clade |
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|1=''K. mediocidica'' |
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|2={{clade |
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|1=''K. kifunensis'' |
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|2={{clade |
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|1=''K. azatica'' |
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|2={{clade |
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|1=''[[Streptomyces tateyamensis]]'' <small>Khan et al. 2010</small> |
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|2={{clade |
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|1=''K. viridis'' |
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|2={{clade |
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|1=''K. acidiphila'' |
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|2=''K. humi'' |
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}} |
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}} |
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}} |
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}} |
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}} |
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}} |
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|2={{clade |
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|1={{clade |
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|1=''[[Kitasatospora purpeofusca|K. purpeofusca]]'' |
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|2={{clade |
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|1="''Streptomyces kaniharaensis''" <small>Shomura & Niida 1970</small> |
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|2={{clade |
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|1={{clade |
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|1=''[[Streptomyces novaecaesareae]]'' <small>Waksman & Henrici 1948</small> |
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|2=''[[Kitasatospora xanthocidica|K. xanthocidica]]'' |
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}} |
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|2={{clade |
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|1=''[[Kitasatospora aureofaciens|K. aureofaciens]]'' |
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|2="''Streptomyces rubellomurinus''" <small>Okuhara et al. 1980</small> |
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}} |
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}} |
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}} |
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}} |
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|2={{clade |
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|1={{clade |
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|1=''K. atroaurantiaca'' |
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|2=''K. gansuensis'' |
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}} |
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|2={{clade |
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|1=''K. paracochleata'' |
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|2={{clade |
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|1={{clade |
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|1=''K. cheerisanensis'' |
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|2=''K. griseola'' |
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}} |
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|2={{clade |
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|1=''K. phosalacinea'' |
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|2={{clade |
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|1=''K. cineracea'' |
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|2=''K. niigatensis'' |
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}} |
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}} |
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}} |
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}} |
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}} |
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}} |
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}} |
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}} |
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}} |
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|} |
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== Species == |
== Species == |
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''Kitasatospora'' comprises the following genera:<ref name=LPSN></ref> |
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* ''[[Kitasatospora arboriphila]]'' |
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{{div col|colwidth=350px}} |
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* ''[[Kitasatospora azatica]]'' |
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* ''[[Kitasatospora |
* ''[[Kitasatospora albolonga|K. albolonga]]'' <small>(Tsukiura et al. 1964) Labeda et al. 2017</small> |
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* ''[[Kitasatospora cinereorecta|K. cinereorecta]]'' <small>(Terekhova and Preobrazhenskaya 1986) Labeda et al. 2017</small> |
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* ''[[Kitasatospora cineracea]]'' |
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* ''K. fiedleri'' <small>Zimmermann et al. 2023</small> |
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* ''[[Kitasatospora cochleata]]'' |
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* "''K. kepongensis''" <small>Rodriguez, Brown & Goodfellow 2005</small> |
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* ''[[Kitasatospora cystarginea]]'' |
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*"''K. melanogena''" <small>Shimazu et al. 1984</small> |
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* ''[[Kitasatospora gansuensis]]'' |
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* ''[[Kitasatospora |
* ''[[Kitasatospora misakiensis|K. misakiensis]]'' <small>(Nakamura 1961) Labeda et al. 2017</small> |
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* "''K. papulosa''" <small>corrig. Nakamura et al. 1989</small> |
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* ''[[Kitasatospora kifunensis]]'' |
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* "''K. pitsanulaokmensis''" <small>Tanasupawat & Jongrungruangchok 2005</small> |
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* ''[[Kitasatospora mediocidica]]'' |
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* "''K. recifensis''" <small>Stamford et al. 2007</small> |
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* ''[[Kitasatospora niigatensis]]'' |
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{{div col end}} |
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* ''[[Kitasatospora nipponensis]]'' |
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* ''[[Kitasatospora paracochleata]]'' |
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* ''[[Kitasatospora paranensis]]'' |
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* ''[[Kitasatospora phosalacinea]]'' |
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* ''[[Kitasatospora putterlickiae]]'' |
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* ''[[Kitasatospora sampliensis]]'' |
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* ''[[Kitasatospora setae]]'' |
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* ''[[Kitasatospora terrestris]]'' |
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* ''[[Kitasatospora viridifaciens]]'' |
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* ''[[Kitasatospora viridis]]'' |
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== See also == |
== See also == |
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* [[List of bacterial genera named after personal names]] |
* [[List of bacterial genera named after personal names]] |
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* [[List of bacterial orders]] |
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* [[List of bacteria genera]] |
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== References == |
== References == |
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<!-- {{Commons}} --> |
<!-- {{Commons}} --> |
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{{NCBI taxid|2063}} |
{{NCBI taxid|2063}} |
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{{Taxonbar|from=Q6417881}} |
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{{Bacteria classification|state=collapsed}} |
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{{Taxonbar|from=Q6417881}} |
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[[Category:Streptomycineae]] |
[[Category:Streptomycineae]] |
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[[Category:Bacteria genera]] |
[[Category:Bacteria genera]] |
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{{actinobacteria-stub}} |
{{actinobacteria-stub}} |
Latest revision as of 11:44, 2 May 2024
Kitasatospora | |
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Kitasatospora setae (type strain) | |
Scientific classification | |
Domain: | Bacteria |
Phylum: | Actinomycetota |
Class: | Actinomycetia |
Order: | Streptomycetales |
Family: | Streptomycetaceae |
Genus: | Kitasatospora corrig. Ōmura et al. 1983 |
Type species | |
Kitasatospora setae corrig. Ōmura et al. 1983[1]
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Species | |
See text. | |
Synonyms | |
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Kitasatospora is an Actinobacteria genus in the family Streptomycetaceae. The genus name comes from Shibasaburo Kitasato, a Japanese bacteriologist.
Phylogeny[edit]
The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[1] and National Center for Biotechnology Information (NCBI)[2]
16S rRNA based LTP_08_2023[3][4][5] | 120 marker proteins based GTDB 08-RS214[6][7][8] | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Species[edit]
Kitasatospora comprises the following genera:[1]
- K. albolonga (Tsukiura et al. 1964) Labeda et al. 2017
- K. cinereorecta (Terekhova and Preobrazhenskaya 1986) Labeda et al. 2017
- K. fiedleri Zimmermann et al. 2023
- "K. kepongensis" Rodriguez, Brown & Goodfellow 2005
- "K. melanogena" Shimazu et al. 1984
- K. misakiensis (Nakamura 1961) Labeda et al. 2017
- "K. papulosa" corrig. Nakamura et al. 1989
- "K. pitsanulaokmensis" Tanasupawat & Jongrungruangchok 2005
- "K. recifensis" Stamford et al. 2007
See also[edit]
- List of bacterial genera named after personal names
- List of bacterial orders
- List of bacteria genera
References[edit]
- ^ a b c A.C. Parte; et al. "Kitasatospora". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved 2023-09-09.
- ^ Sayers; et al. "Kitasatospora". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2023-09-09.
- ^ "The LTP". Retrieved 20 November 2023.
- ^ "LTP_all tree in newick format". Retrieved 20 November 2023.
- ^ "LTP_08_2023 Release Notes" (PDF). Retrieved 20 November 2023.
- ^ "GTDB release 08-RS214". Genome Taxonomy Database. Retrieved 10 May 2023.
- ^ "bac120_r214.sp_label". Genome Taxonomy Database. Retrieved 10 May 2023.
- ^ "Taxon History". Genome Taxonomy Database. Retrieved 10 May 2023.
External links[edit]
"Kitasatospora". National Center for Biotechnology Information (NCBI).