Siphoviridae

Siphoviridae
Bacillus Phage Gamma , Isolat d'Herelle
Systematics
Classification : Viruses Area : Duplodnaviria Empire : Heunggongvirae Phylum : Uroviricota Class : Caudoviricetes Order : Caudovirales Family : Siphoviridae
Taxonomic characteristics
Genome : dsDNA linear Baltimore : Group 1 Symmetry : icosahedral, tailed Cover : no
Scientific name
Siphoviridae
Left
NCBI  Taxonomy: 10699 ViralZone ( ExPASy , SIB): 142 ICTVdB Virus Code : 02.066

Structure of a virus particle of the λ phage , a typical representative of the Siphoviridae

The virus family Siphoviridae ( Greek σίφων siphon , German 'water pipe' ) comprises bacteriophages of the order Caudovirales with a linear, double-stranded DNA genome approx. 22–121 kBp in length and a 50–60 nm in diameter icosahedral capsid with a 56–570 nm long, non-contractile tail part. This tail part consists of stacked discs with a diameter of 7 to 10 nm, which are made up of six identical subunits.

The genera within the Siphoviridae differ in terms of the organization of the genome , the mechanisms of DNA packaging and the presence of a DNA polymerase . Some genera (λ-like to L5-like viruses) have an isometric capsid, the others the capsid is elongated and non-isometric.

Important species of the family are the Escherichia virus lambda (formerly lambda phage), the Chi phage and the Phi80 phage . In addition to the eight genera so far, the family also includes 142 other species that are not assigned to any genus (for example the Bacillus phage Gamma from the genus Wbetavirus (alias Wbetalikevirus )).

Siphoviridae have besides bacteria and archaea to host .

Systematics

According to the ICTV (November 2018 – February 2019), the Siphoviridae family includes the following genera and exemplary species (outdated names are given in brackets as aliases):

Family Siphoviridae

00Subfamily Arquatrovirinae

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• Genus Arequatrovirus (formerly R4virus )

• Species Streptomyces virus R4

• Genus Camvirus
• Genus Likavirus

00Subfamily Bclasvirinae

---

• Genus Acadian virus
• Genus Coopervirus
• Genus Pegunavirus (alias Pg1virus or Pgonelikevirus )
• Genus Pipefish virus
• Genus rosebush virus

00Subfamily Chebruvirinae

---

• Genus Brujitavirus

00Subfamily Dclasvirinae

---

• Genus Hawkeyevirus
• Genus plot virus

00Subfamily Guernseyvirinae

---

• Genus Jersey virus (also known Jersey Like Virus )
• Genus Kagunavirus (aka K1gvirus )
• Genus Cornellvirus (alies Sp31virus )

• Species Salmonella virus SP31

00Subfamily Mccleskeyvirinae

---

• Genus Limdunavirus (alias Lmd1virus )
• Genus Unaquatrovirus (alias Una4virus )

00Subfamily Mclasvirinae

---

• Genus bongovirus
• Genus Reyvirus (aka Reylikevirus )

00Subfamily Nclasvirinae

---

• Genus butter virus
• Genus Charlie virus (also known as Charlie Like Virus )

• Species Mycobacterium virus Charlie in "Cluster N"

• Genus redivirus

00Subfamily Nymbaxtervirinae

---

• Genus Baxter virus
• Genus Nymphadoravirus

00Subfamily Pclasvirinae

---

• Genus Bignuzvirus (aka Bignuzlikevirus )
• Genus fishburn virus
• Genus Phayoncevirus

00Subfamily Tunavirinae

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• Genus Rogunavirus (alias Rogue1virus , Jk06likevirus )

• Species: Escherichia virus Eb49

• Escherichia phage Eb49

• Species: Escherichia virus Jk06

• Escherichia phage Jk06

• Species: Escherichia virus AHS24 (alias Escherichia phage AHS24 )

• Escherichia phage vB_EcoS_AHS24
• Escherichia phage bV_EcoS_AHP24

• Species: Escherichia virus AHP42 (alias Escherichia phage AHP42 )

• Escherichia phage vB_EcoS_AHP42

• Species: Escherichia virus AKS96 (alias Escherichia phage AKS96 )

• Escherichia phage vB_EcoS_AKS96

• Species Escherichia virus KP26

• Enterobacteria phage KH4
• Enterobacteria phage phiJLA23
• Enterobacteria phage phiKP26

• Species: Escherichia virus Rogue1 (aka Escherichia phage Rogue1 )

• Enterobacteria phage vB_EcoS_Rogue1

• Species: Escherichia virus C119 (alias Escherichia phage C119 )
• Species: Escherichia virus E41c (alias Escherichia phage e4 / 1c )

• Genus Rtpvirus (alias Rtplikevirus )

• Species: Escherichia virus Rtp (alias Escherichia phage Rtp , type)
• Species: Escherichia virus ACGM12 (alias Enterobacteria phage vB_EcoS_ACG-M12 )

• Genus sertoctavirus
• Genus Tlsvirus (alias Tlslikevirus )

• Species: Escherichia virus TLS (alias Escherichia phage Tls , Typus)
• Species: Salmonella virus SP126 (aka Salmonella phage FSL SP-126 )

• Genus Tunavirus (aka T1virus , Tunalikevirus , T1-like viruses ), isometric capsid , 6 species

• Species Escherichia virus T1 (alias Enterobacteria Phage T1 )

• Genus Webervirus (alias Kp36virus , Kp36likevirus )

• Species Klebsiella virus KP36 (alias Klebsiella phage KP36 , type)
• Species: Enterobacter phage F20

00 Subfamily not determined:

---

• Genus Abbeymicolonvirus
• Genus Abidjanvirus (aka Ab18virus )
• Genus Ahduovirus

• Species Burkholderia virus AH2

• Genus amigovirus
• Genus Anatolevirus
• Genus Andromedavirus (aka Andromedalikevirus )
• Genus Appavirus
• Genus apricot virus
• Genus Armstrong virus
• Genus Attisvirus
• Genus attoomivirus
• Genus Austintatious virus
• Genus bantam virus
• Genus Barnyardvirus (aka Barnyardlikevirus )
• Genus Beetrevirus
• Genus bendigovirus
• Genus Bernalvirus (alias Bernal13virus )
• Genus better cat virus
• Genus Bingvirus
• Genus Biseptimavirus (alias 77likevirus , sic!)
• Genus Bowservirus
• Gender of Bridgette Virus
• Genus Britbratvirus
• Genus Bronvirus (alias Bronlikevirus )

• Species " Mycobacterium phage Gabriela " in "Cluster L2"
• Species " Mycobacterium phage Itos " in "Cluster L2"

• Genus Brussowvirus (alias Sfi11virus , Sfi1unalikevirus , Sfi11-like phage )

• Species Streptococcus virus Sfi11

• Genus Casadabanvirus (alias D3112virus , D3112likevirus )

• Species Pseudomonas virus D3112

• Genus Cbastvirus (alias Cba13unalikevirus )

• Species Cellulophaga virus ST (alias Cellulophaga phage phiST )

• Cellulophaga phage phi13: 1
• Cellulophaga phage phi19: 2

• Genus Cecivirus (aka Iebhlikevirus )

• Species Bacillus virus 250 (alias Bacillus phage 250 )
• Species Bacillus virus IEBH (aka Bacillus phage IEBH )

• Genus Ceduovirus (alias C2virus , C2likevirus , C2-like viruses ), non-isometric capsid , 2 species, about 3 suggested, and about 200 subtypes

• Species Lactococcus virus bIL67 (alias Lactococcus Phage bIL67 )
• Species Lactococcus virus c2 (alias Lactococcus Phage c2 )

• Genus Ceetrepovirus

• Species Corynebacterium virus C3PO
• Species Corynebacterium virus Darwin
• Species Corynebacterium virus Zion

• Genus Cequinquevirus (alias C5virus , C5likevirus , C5-like viruses )

• Species Lactobacillus virus c5 (alias Lactobacillus Phage c5 )

• Genus Chenonavirus (alias Che9cvirus , Che9clikevirus )

• Species Mycobacterium virus Che9c in "Subcluster I2"

• Genus Cheoctovirus (alias Che8virus , Che8likevirus )

• Species Mycobacterium virus Tweety in "Subcluster E6"

• Genus Chivirus (aka Chilikevirus )

• Species Salmonella virus Chi (alias Salmonella phage Chi , Phage χ )

• Genus Chunghsing virus
• Genus Cimpunavirus
• Genus Cinunavirus
• Genus Coetzeevirus (alias Phijl1virus , Phijlunalikevirus )

• Species Lactobacillus virus phiJL1

• Genus coral virus
• Genus Corndogvirus (alias Corndoglikevirus )
• Genus Cronus virus
• Genus Daredevil virus
• Genus Decurrovirus
• Genus delepquintavirus
• Genus Demosthenes virus
• Genus Detrevirus (alias D3virus , D3likevirus )

• Species Pseudomonas virus D3

• Genus Dhillonvirus (alias Hk578virus , Hk578likevirus )

• Species Escherichia virus HK578

• Genus Dismasvirus
• Genus doucette virus
• Genus Edenvirus
• Genus efquatrovirus
• Genus egg virus
• Genus iron starvirus

• Species Xanthomonas virus PhiL7

• Genus Elerivirus
• Genus Emalynvirus
• Genus Eyrevirus
• Genus Fairfaxidum virus
• Genus Farahnazvirus
• Genus Feofaniavirus
• Genus Fibralongavirus
• Genus Franklin Bay virus
• Genus Fromanvirus (alias L5virus , L5likevirus , L5-like viruses ), isometric capsid , 60 species

• Species Mycobacterium virus Bxb1 in "Subcluster A1"
• Species Mycobacterium virus Bxz2
• Species Mycobacterium virus D29 (alias Mycobacterium Phage D29 ) in "Subcluster A2"
• Species Mycobacterium virus L5 (alias Mycobacterium Phage L5 )
• Species Mycobacterium virus Gladiator
• Species Mycobacterium virus Heldan in "Subcluster A3"
• Species Mycobacterium virus Peaches in "Subcluster A4"
• Species Mycobacterium virus U2
• Species " Mycobacterium phage BabyRay "
• Species " Mycobacterium phage Benvolio "
• Species " Mycobacterium phage Chupacabra "
• Species " Mycobacterium phage DaVinci " in "Subcluster A6"
• Species " Mycobacterium phage EagleEye " in "Subcluster A16"
• Species " Mycobacterium phage Et2Brutus " in "Subcluster A11"
• Species " Mycobacterium phage Fernando " in "Subcluster A3"
• Species " Mycobacterium phage Fred313 " in "Subcluster A3"
• Species " Mycobacterium phage Isca " in "Subcluster A3"
• Species " Mycobacterium phage Puppy " in "Subcluster A3"
• Species " Mycobacterium phage TNguyen7 " in "Subcluster A3"

• Genus Gaiavirus
• Genus galaxy virus
• Genus Galunavirus
• Genus Gamtrevirus
• Genus sprout virus
• Genus getseptimavirus
• Genus Ghobesvirus
• Genus Giles virus
• Genus Gillian virus
• Genus Godonkavirus
• Genus Goodman virus
• Genus Gordonvirus

• " Gordonia phage Mariokart " in the "Cluster DR"

• Genus Gordtnkvirus
• Genus Gorganvirus
• Genus Gorjum virus
• Genus Gustavvirus
• Genus Harrison virus
• Genus Hedwig virus
• Genus Helsingorvirus (alias Cba181virus , Cba18unalikevirus )

• Species Cellulophaga virus Cba121

• Cellulophaga phage phi12: 1
• Cellulophaga phage phi12: 3

• Species Cellulophaga virus Cba171

• Cellulophaga phage phi17: 1

• Species Cellulophaga virus Cba181 (type)

• Cellulophaga phage phi18: 1
• Cellulophaga phage phi18: 2

• Genus Hendrixvirus (alias Hk97virus , HK97-like viruses ), isometric capsid , separated from lambda virus

• Species Escherichia virus HK022 (alias Enterobacteria Phage HK022 )
• Species Escherichia virus HK97 (alias Enterobacteria Phage HK97 )

• Genus Hiyaavirus
• Genus holosalinivirus
• Genus Homburg virus (alias P70 virus )

• Species Listeria virus P70

• Genus Ikeda virus
• Genus Ilzatvirus
• Genus Incheonvrus (aka P12002virus )

• Species Polaribacter virus P12002L
• Species Polaribacter virus P12002S

• Genus Inhavirus (alias P12024virus )

• Species Nonlabens virus P12024L
• Species Nonlabens virus P12024S

• Genus Jacevirus
• Genus Jenstvirus
• Genus Jesfedecavirus
• Genus Juicebox virus
• Genus Kairosalinivirus
• Genus Kelleziovirus
• Genus Kilunavirus

• Species Burkholderia virus KL1 (Burkholderia phage KL1)

• Genus clement virus
• Genus Kojivirus
• Genus Korravirus
• Genus Kostyavirus (alias Cjw1virus , Cjwunalikevirus )

• Species Mycobacterium virus CJW1

• Genus Krampus virus
• Genus cryptosaline virus
• Genus Lacusarx virus
• Genus lambdavirus (alias lambdalikevirus , λ ‐ like phages , lambda-like viruses ), isometric capsid , 4 species

• Species Escherichia virus Lambda (alias Enterobacteria-Phage Lambda , Bakteriophage Lambda , Lambda-Phage , Phage λ )

• Genus Lanavirus
• Genus Laroyevirus
• Genus lentavirus
• Genus Love Virus
• Genus Liefievirus (aka Halolikevirus )

• Species Mycobacterium virus Halo
• Species Mycobacterium virus Liefie
• Species " Mycobacterium phage BPs " (proposed) in "Cluster G"

• BPsΔ33HTH (gantechnical mutant) with variants BPsΔ33HTH-HRM1 and BPsΔ33HTH-HRM10

• Genus locivirus

• Species Acinetobacter virus IMEAB3 (Acinetobacter phage IME_AB3)

• Genus Lomovskayavirus (alias Phic31virus , Phic3unalikevirus , PhiC31-like viruses , φC31-like viruses ), non-isometric capsid , 3 species

• Species Streptomyces virus phiC31 (alias Streptomyces Phage PhiC31 , Streptomyces Phage φC31 )

• Genus Luckybarnesvirus
• Genus Luckytenvirus
• Genus Lughvirus
• Genus Lwoffvirus (alias Tp21virus , Tp2unalikevirus )

• Species Bacillus virus TP21

• Genus Magadivirus
• Genus Majavirus
• Genus Manhattan virus
• Genus Mapvirus (alias Ff47virus )

• Species Mycobacterium virus Ff47
• Species Mycobacterium virus Muddy (alias Mycobacterium phage Muddy ) in "Cluster AB"

• Genus Mardecavirus (alias Ssp2virus )

• Species Vibrio virus SSP002

• Genus Marvin virus
• Genus Max Rubner Virus
• Genus Mementomorivirus
• Genus metamorphoovirus
• Genus Minunavirus
• Genus Moineauvirus (alias Sfi21dt1virus , Sfi21dtunalikevirus , Sfi21-like phage )

• Species Streptococcus virus DT1
• Species Streptococcus virus Sfi19
• Species Streptococcus virus Sfi21

• Genus mudcat virus
• Genus Montyvirus
• Genus mudcat virus
• Genus Murray virus
• Genus Nanhaivirus
• Genus Nazgul virus
• Genus Neferthenavirus
• Nickievirus genus
• Genus Nipunavirus (alias Np1virus )
• Genus Nonagvirus
• Genus Nonanavirus
• Genus Nyceiraevirus
• Genus oengus virus
• Genus Omegavirus (aka Omegalikevirus )

• Species Mycobacterium virus Courthouse in "Cluster E"
• Species Mycobacterium virus Omega (aka Mycobacterium phage Omega )

• Genus Oneupvirus
• Genus orchid virus
• Genus Oshimavirus (alias P23virus , P23likevirus )

• Species Thermus virus P23-45

• Genus Pahexavirus (alias Pa6virus )

• Species Propionibacterium virus PA6

• Genus Pamexvirus (alias Pamx74virus )

• Species Pseudomonas virus PaMx28
• Species Pseudomonas virus PaMx74

• Genus papyrus virus (aka Send513virus )

• Species Mycobacterium virus Send513

• Genus Patience Virus
• Genus Pbi1virus (alias Pbiunavirus , Pbiunalikevirus )

• Species Mycobacterium virus PBI1

• Genus Pepyhexavirus (aka Pepy6virus )

• Species Rhodococcus virus Pepy6

• Genus Phicbkvirus (alias Phicbklikevirus )
• Genus Phietavirus (aka Phietalikevirus )
• Genus Phifelvirus (alias Phifllikevirus )
• Genus Picard virus
• Genus Pikmin virus
• Genus Poushouvirus
• Genus Priunavirus
• Genus psavirus
• Genus Psimunavirus (aka Psimunalikevirus , PsiM1-like viruses , ψM1-like viruses ), non-isometric capsid , 1 species, 2 proposed

• Species Methanobacterium virus psiM1 (alias Methanobacterium Phage PsiM1 , Methanobacterium Phage ψM1 )

• Genus powder virus (alias Pfr1virus )

• Species Propionibacterium virus PFR1

• Genus Quhwah virus
• Genus Raleigh virus
• Genus Ravinvirus (alias N15virus , N15likevirus , N15-like viruses ), non-isometric capsid

• Species Escherichia virus N15 (alias Enterobacteria Phage N15 )
• Species " Yersinia Phage PY54 " (alias " Bacteriophage PY54 ", alias " Yersinia enterocolitica phage PY54 " - suggested)

• Genus Rerduovirus (aka Rer2virus )

• Species Rhodococcus virus RER2

• Genus Rigallicvirus
• Genus Rimavirus
• Genus Roufvirus (alias Pis4avirus )

• Species Aeromonas virus pIS4A

• Genus Rogerhendrix virus
• Genus Ronaldovirus
• Genus Rouf virus
• Genus Rowavirus
• Genus Ruthyvirus
• Genus Samistivirus
• Genus Samunavirus
• Genus Sanovirus
• Genus Sansavirus
• Genus Saphexavirus (alias Sap6virus , Sap6likevirus )

• Species Enterococcus virus SAP6

• Genus sashavirus
• Genus Sasvirus
• Genus Saundersvirus (alias Tp84virus )

• Species Geobacillus virus Tp84

• Genus Scapunavirus
• Genus platypus virus
• Genus Schubert virus
• Genus Septimatrevirus (alias Septima3virus )

• Species Pseudomonas virus 73 (Pseudomonas phage 73)
• Species Pseudomonas virus Ab26 (Pseudomonas phage vB_PaeS_SCH_Ab26)
• Species Pseudomonas virus Kakheti25 (Pseudomonas phage vB_Pae-Kakheti25)

• Genus Seuratvirus
• Genus Seussvirus
• Genus Sextaecvirus
• Genus sitaravirus
• Genus Skunavirus (alias Sk1virus , Skunalikevirus , Sk1likevirus , Sk1-like phage )

• Species Lactococcus virus sk1

• Genus slash virus
• Genus smoothie virus
• Genus Sonalivirus
• Genus soups virus
• Genus sour virus
• Genus Spbetavirus (alias Spbetalikevirus , SPbeta-like viruses ), 1 species

• Species Bacillus virus SPbeta (alias Phage SPβ )

• Genus Squash Virus
• Genus Stanholt virus
• Genus Steinhofvirus (aka Jwxvirus )

• Species Achromobacter virus JWX
• Species Achromobacter virus 83-24

• Genus tank virus
• Genus terapin virus
• Genus Tigunavirus
• Genus Timquatrovirus (alias Tm4virus , Tm4likevirus )

• Species Mycobacterium virus Larva in "Subcluster K5"
• Species Mycobacterium virus TM4 in "Subcluster K2"
• Species " Mycobacterium phage Adephagia " in "Subcluster I2"
• Species " Mycobacterium phage Amgine " in "Subcluster K6"
• Species " Mycobacterium phage Keshu " in "Subcluster K3"
• Species " Mycobacterium phage Krueger " in "Subcluster K6"
• Species " Mycobacterium phage SamScheppers " in "Subcluster K4"
• Species " Mycobacterium phage ShedlockHolmes " in "Subcluster K3"
• Species " Mycobacterium phage Validus " in "Subcluster K1"
• Species " Mycobacterium phage Wintermute " in "Subcluster K4"
• Species " Mycobacterium phage ZoeJ " (proposed) in "Subcluster K2"

• ZoeJΔ45 (genetic mutant)

• Genus Tinduovirus (aka Tin2virus )

• Species Tsukamurella virus TIN2

• Genus Titan virus
• Genus tortellinivirus
• Genus Triavirus (alias 3alikevirus , sic!)
• Genus Trigintaduovirus
• Genus Trinavirus
• Genus Tripp virus
• Genus Unahavirus
• Genus vash virus
• Genus Vegas virus
• Genus vendettavirus
• Genus Vhulanivirus
• Genus Vidquintavirus
• Genus Vieuvirus
• Genus Vividuovirus
• Genus Vojvodinavirus
• Genus Wbetavirus (alias Wbetalikevirus )

• Species " Bacillus Phage Gamma " (suggested)

• Genus weasel virus
• Genus wildcat virus
• Genus Wilnyevirus
• Genus wizard virus
• Genus Woesvirus
• Genus Woodruff virus
• Genus Xiamenvirus (alias Rdjlvirus ),

• Species Roseobacter virus RDJL1
• Species Roseobacter virus RDJL2

• Genus Xipdecavirus (alias Xp10virus , Xp10likevirus )

• Species Xanthomonas virus Xp10

• Genus Woodruff virus (alias Ydn12virus )

• Species Streptomyces virus YDN12

• Genus Yang virus
• Genus Yuavirus (aka Yualikevirus )
• Genus Yvonnevirus
• Genus Zetavirus

  proposed genera:

• Genus " Cba39unalikevirus "

• Species: " Cellulophaga phage phi39: 1 "

• Genus " Cba46unalikevirus "

• Species: " Cellulophaga phage phi46: 1 "

• Genus " Cba10unalikevirus "

• Species: " Cellulophaga phage phi10: 1 " (type)
• Species: " Cellulophaga phage phi19: 1 "

• Genus " R1tlikevirus "

• Species: " Lactococcus phage r1t " (alias Bacteriophage r1t )

• Gender undetermined (selection of ICTV-unconfirmed species):

• Species Rhodococcus virus RGL3 (alias Rhodococcus phage RGL3 , formerly belonging to genus L5virus alias L5likevirus )
• Species " Mycobacterium phage Cborch11 "
• ? Species " Microbacterium phage ChickenNugget "
• Species " Mycobacterium phage Damien "
• ? Species " Microbacterium phage IAmGroot " in the "Cluster EH"
• Species " Mycobacterium phage Indlulamithi "
• Species " Mycobacterium phage Lixy "
• Species " Mycobacterium phage Oaker "
• Species " Mycobacterium phage Phreeze "
• Species " Mycobacterium phage Thumb "
• Species " Mycobacterium phage TGIPhriday "
• Species " Achromobacter phage JWF " (genus Steinhof virus ?)
• Species " Achromobacter phage phiAxp-1 "
• Species " Achromobacter phage phiAxp-2 "
• Species " Arthrobacter phage Beagle "
• Species " Arthrobacter phage Lego "
• Species " Arthrobacter phage love "
• Species " Arthrobacter phage Maja "
• Species " Arthrobacter phage Mimi " - to be distinguished from Acanthamoeba polyphaga Mimivirus (APMV)
• Species " Arthrobacter phage Sputnik " - to differentiate Mimivirus-dependent virus Sputnik , a virophage
• Species " ψM2-like phage " (alias " Methanobacterium phage psiM2 ", " Archaeophage PsiM2 ")
• Species " Bacillus phage Basilisk " (aka " Bacillus cereus phage Basilisk ")
• Species " Streptococcus phage Dp-1 " (alias " Pneumococcus phage Dp-1 ", " Diplophage 1 ")
• Species Vibrio Phage 149 (type IV) (alias " Phage ϕ149 ", formerly genus T5virus alias T5likevirus , taken from this genus by ICTV 2015, as too little data is available for this assignment)

The genome organization in the genera L5virus , Lambdavirus , Phic31virus , Sfi11virus , Sfi21dt1virus , Sk1virus and Tm4virus , as well as in the proposed genus “ ψM2 ‐ like phage ” suggests that these could form a lambda supergroup (or subfamily).

The genus Cetovirus was moved by the ICTV to the new family Demerecviridae , subfamily Ermolyevavirinae in March 2020 , as was the genus Jesfedecavirus ; the genus Tequintavirus (alias T5virus , T5likevirus , T5-like viruses ) with isometric capsid and the species Escherichia virus T5 (alias Enterobacteria Phage T5 ) as well as Salmonella virus Stitch etc. were moved to the subfamily Markadamsvirinae of this family; the genera Novosibvirus and Sugarlandvirus as well, but without subfamily assignment . According to ICTV, the genus “ Chungbukvirus ” with the type species “ Pseudomonas virus Ptobp6g ” (Pseudomonas phage phi_Pto-bp6g) differs considerably from the Sipohoviridae and has genes in common with the Myoviridae ; it is currently no longer listed by ICTV. The genus Lilyvirus remains under the caudovirales , but initially without family assignment .

literature

• CM Fauquet, MA Mayo et al .: Eighth Report of the International Committee on Taxonomy of Viruses. London / San Diego, 2004.
• David M. Knipe, Peter M. Howley, et al . (Ed.): Fields' Virology. 4th & 3rd edition, Philadelphia 2001.

Web links

• NCBI: Siphoviridae: Genera and Species

Individual evidence

1. ↑ ^{a b c} NCBI: Bacillus phage Gamma (species)
2. ↑ ^{a b c d e} Daniel Bojar: Spectrum of Science, June 2020 , Spectrum of Science, June 2020, pp. 40–45
3. ↑ ^{a b c d} ICTV: ICTV Taxonomy history: Enterobacteria phage T4 , EC 51, Berlin, Germany, July 2019; Email ratification March 2020 (MSL # 35)
4. ↑ ^{a b c d e f g h i j k l m n o p q r s t u v w x y z aa ab ac ad ae af} Rebekah M. Dedrick, Carlos A. Guerrero-Bustamante, Rebecca A. Garlena, Daniel A. Russell, Katrina Ford, Kathryn Harris, Kimberly C. Gilmour, James Soothill, Deborah Jacobs-Sera, Robert T. Schooley, Graham F. Hatfull, Helen Spencer: Engineered bacteriophages for treatment of a patient with a disseminated drug-resistant Mycobacterium abscessus , in: Nat Med 25, pp. 730-733, May 8, 2019, doi: 10.1038 / s41591-019-0437-z . Free author manuscript of November 8, 2019, PMC 6557439 (free full text), PMID 31068712 . ResearchGate
5. ↑ NCBI: Rugunavirus (genus)
6. ↑ NCBI: Mycobacterium virus Gabriela (species)
7. ↑ NCBI: Mycobacterium virus Itos (species)
8. ↑ NCBI: Mycobacterium virus Heldan (species)
9. ↑ ICTV: ICTV Taxonomy history: Mycobacterium virus Heldan (MSL # 35)
10. ↑ NCBI: Mycobacterium phage BabyRay (species)
11. ↑ ^{a b c d e f g h i} Ed Yong: A Huge Discovery in the World of Viruses , on: The Atlantic, February 20, 2020
12. ↑ NCBI: Mycobacterium phage Benvolio (species)
13. ↑ NCBI: Mycobacterium phage Chupacabra (species)
14. ↑ NCBI: Mycobacterium virus Fred313 (species)
15. ↑ NCBI: Mycobacterium virus Isca (species)
16. ↑ NCBI: Mycobacterium virus Puppy (species)
17. ↑ NCBI: Mycobacterium virus TNguyen7 (species)
18. ↑ PhageDb: Gordonia phage Mariokart
19. ↑ Evan Bennett, Colton White, Shallee Page: Analysis of the Complete Genome of Gordonia Phage Mariokart , Franklin Pierce University 2020
20. ↑ ^{a b c d e f g} Erna Li, Jiangtao Zhao, Yanyan Ma, Xiao Wei et al. : Characterization of a novel Achromobacter xylosoxidans specific siphoviruse: phiAxp-1 , in: Scientific Reports, Volume 6, February 24, 2016, p. 21943, doi: 10.1038 / srep21943
21. ^ ^{A b c} Graham F. Hatfull: Phage Therapy Treats Patient with Drug-Resistant Bacterial Infection , at: Howard Hughes Medical Institute, May 8, 2019
22. ↑ NCBI: Mycobacterium phage BPs (species)
23. ↑ NCBI: Acinetobacter virus IMEAB3 (species)
24. ↑ NCBI: Acinetobacter phage IME_AB3 (isolate)
25. ↑ dsDNA Viruses> Siphoviridae , in: ICTV 9th Report (2011)
26. ↑ NCBI: Pseudomonas virus Ab26 (species)
27. ↑ NCBI: Pseudomonas phage vB_PaeS_SCH_Ab26 (isolate)
28. ↑ NCBI: Pseudomonas virus Kakheti25 (species)
29. ↑ NCBI: Pseudomonas phage vB_Pae-Kakheti25 (isolate)
30. ↑ NCBI: Achromobacter phage JWX (species)
31. ↑ ^{a b c} Brigitte Dreiseikelmann, Boyke Bunk, Cathrin Spröer, Manfred Rohde, Manfred Nimtz, Johannes Wittmann: Characterization and Genome Comparisons of Three Achromobacter Phages of the Family Siphoviridae , in: Arch Virol 162 (8), March 29, 2017, p 2191-2201, doi: 10.1007 / s00705-017-3347-8 , PMID 28357512
32. ↑ NCBI: Achromobacter virus 83-24 (species)
33. ↑ NCBI: Mycobacterium phage ZoeJ (species)
34. ↑ Proux C, van Sinderen D, Suarez J, Garcia P, Ladero V, Fitzgerald GF, Desiere F, Brüssow H: The dilemma of phage taxonomy illustrated by comparative genomics of Sfi21-like Siphoviridae in lactic acid bacteria . In: J. Bacteriol. . 184, No. 21, 2002, pp. 6026-36. doi : 10.1128 / JB.184.21.6026-6036.2002 . PMID 12374837 . PMC 135392 (free full text).
35. ^ D Gutiérrez, EM Adriaenssens, B Martínez, A Rodríguez, R Lavigne, AM Kropinski, P García: Three proposed new bacteriophage genera of staphylococcal phages: "3alikevirus", "77likevirus" and "Phietalikevirus" . In: Archives of Virology . 159, No. 2, September 11, 2013, pp. 389-98. doi : 10.1007 / s00705-013-1833-1 . PMID 24022640 .
36. ^ Taxonomy Proposals Awaiting Ratification at ICTV
37. ^ Taxonomy Proposals Pending at ICTV
38. ↑ K. Holmfeldt, N. Solonenko, M. Shah, K. Corrier, L. Riemann, NC Verberkmoes, MB Sullivan: Twelve previously unknown phage genera are ubiquitous in global oceans . In: Proceedings of the National Academy of Sciences . 110, No. 31, 2013, pp. 12798-803. doi : 10.1073 / pnas.1305956110 . PMID 23858439 . PMC 3732932 (free full text).
39. ↑ YD Niu, TA McAllister, JHE Nash, AM Kropinski, K. Stanford: Four Escherichia coli O157: H7 Phages: A New Bacteriophage Genus and Taxonomic Classification of T1-Like Phages . In: PLoS ONE . 9, No. 6, 2014, p. E100426. doi : 10.1371 / journal.pone.0100426 . PMID 24963920 . PMC 4070988 (free full text).
40. ↑ NCBI: Cellulophaga phage phi39: 1 (species)
41. ↑ NCBI: Cellulophaga phage phi46: 1 (species)
42. ↑ NCBI: Cellulophaga phage phi10: 1 (species)
43. ↑ NCBI: Cellulophaga phage phi19: 1 (species)
44. ↑ NCBI: Lactococcus phage r1t (species)
45. ^ NCBI: unclassified Siphoviridae
46. ↑ ICTV: ICTV Taxonomy history: Rhodococcus virus RGL3 , EC 51, Berlin, Germany, July 2019; Email ratification March 2020 (MSL # 35)
47. ↑ PhageDb: Microbacterium phage Chicken Nugget
48. ↑ PhageDb: Microbacterium phage IAmGroot
49. ↑ PhageDb: Mycobacterium phage Lixy (Siphoviridae)
50. ↑ PhageDb: Mycobacterium phage TGIPhriday (Siphoviridae)
51. ↑ NCBI: Achromobacter phage JWF (species)
52. ↑ NCBI: Achromobacter phage phiAxp-1 (species)
53. ↑ NCBI: Achromobacter phage phiAxp-2 (species)
54. ↑ NCBI: Methanobacterium phage psiM2 (species)
55. ↑ NCBI: Bacillus phage Basilisk (species)
56. ↑ Viruses Like Herpes and Zika Will Need to Be Reclassified, Here's Why , on: SciTechDaily of September 27, 2019, source: San Diego State University, Fig. 2a
57. ↑ NCBI: Streptococcus phage Dp-1 (species)
58. ↑ Maureen McDonnell, Concepcion Ronda-Lain, Alexander Tomasz: “Diplophage”: a bacteriophage of Diplococcus pneumoniae , Virology Volume 63, No. 2, February 1975, pp. 577-582, doi: 10.1016 / 0042-6822 (75) 90329 -3
59. ↑ ICTV: ICTV Taxonomy history: Vibrio phage 149 (type IV) , EC 47, London, UK, July 2015; Email ratification 2016 (MSL # 30)
60. ^ Andrew M. Kropinski et al : To amend the description of the T5likevirus ; and, add four (4) new species , on: Talk ICTVonline
61. ↑ Harald Brüssow, Frank Desiere: Comparative phage genomics and the evolution of Siphoviridae : insights from dairy phages . In: Mol Microbiol. 39, No. 2, 2001, pp. 213-222. doi: 10.1046 / j.1365-2958.2001.02228.x , PMID 11136444 , December 21, 2001, keyword 'λ supergroup'.
62. ↑ ICTV: ICTV Taxonomy history: Cetovirus , EC 51, Berlin, Germany, July 2019; Email ratification March 2020 (MSL # 35)
63. ↑ NCBI: Pseudomonas phage phiPto-bp6g