PRDM9: Difference between revisions
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==Function== |
==Function== |
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PRDM9 is thought to mediate the process of [[Recombination_hotspot|meiotic homologous recombination]].<ref name="pmid21460839">{{cite journal | author = Smagulova F, Gregoretti IV, Brick K, Khil P, Camerini-Otero RD, Petukhova GV | title = Genome-wide analysis reveals novel molecular features of mouse recombination hotspots | journal = Nature | volume = 472 | issue = 7343 | pages = 375–8 |date=April 2011 | pmid = 21460839 | doi = 10.1038/nature09869 }}</ref> |
PRDM9 is thought to mediate the process of [[Recombination_hotspot|meiotic homologous recombination]].<ref name="pmid21460839">{{cite journal | author = Smagulova F, Gregoretti IV, Brick K, Khil P, Camerini-Otero RD, Petukhova GV | title = Genome-wide analysis reveals novel molecular features of mouse recombination hotspots | journal = Nature | volume = 472 | issue = 7343 | pages = 375–8 |date=April 2011 | pmid = 21460839 | doi = 10.1038/nature09869 | pmc=3117304}}</ref> |
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==Notes== |
==Notes== |
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{{refbegin | 2}} |
{{refbegin | 2}} |
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*{{cite journal |author=Baudat F, Buard J, Grey C, ''et al.'' |title=PRDM9 is a major determinant of meiotic recombination hotspots in humans and mice. |journal=Science |volume=327 |issue= 5967 |pages= 836–40 |year= 2010 |pmid= 20044539 |doi= 10.1126/science.1183439 }} |
*{{cite journal |author=Baudat F, Buard J, Grey C, ''et al.'' |title=PRDM9 is a major determinant of meiotic recombination hotspots in humans and mice. |journal=Science |volume=327 |issue= 5967 |pages= 836–40 |year= 2010 |pmid= 20044539 |doi= 10.1126/science.1183439 }} |
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*{{cite journal |author=Berg IL, Neumann R, Lam KW, ''et al.'' |title=PRDM9 variation strongly influences recombination hot-spot activity and meiotic instability in humans. |journal=Nat. Genet. |volume=42 |issue= 10 |pages= 859–63 |year= 2010 |pmid= 20818382 |doi= 10.1038/ng.658 }} |
*{{cite journal |author=Berg IL, Neumann R, Lam KW, ''et al.'' |title=PRDM9 variation strongly influences recombination hot-spot activity and meiotic instability in humans. |journal=Nat. Genet. |volume=42 |issue= 10 |pages= 859–63 |year= 2010 |pmid= 20818382 |doi= 10.1038/ng.658 |pmc=3092422}} |
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*{{cite journal |author=Irie S, Tsujimura A, Miyagawa Y, ''et al.'' |title=Single-nucleotide polymorphisms of the PRDM9 (MEISETZ) gene in patients with nonobstructive azoospermia. |journal=J. Androl. |volume=30 |issue= 4 |pages= 426–31 |year= |pmid= 19168450 |doi= 10.2164/jandrol.108.006262 }} |
*{{cite journal |author=Irie S, Tsujimura A, Miyagawa Y, ''et al.'' |title=Single-nucleotide polymorphisms of the PRDM9 (MEISETZ) gene in patients with nonobstructive azoospermia. |journal=J. Androl. |volume=30 |issue= 4 |pages= 426–31 |year= 2009|pmid= 19168450 |doi= 10.2164/jandrol.108.006262 }} |
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*{{cite journal |author=Sun XJ, Xu PF, Zhou T, ''et al.'' |title=Genome-wide survey and developmental expression mapping of zebrafish SET domain-containing genes. |journal=PLoS ONE |volume=3 |issue= 1 |pages= e1499 |year= 2008 |pmid= 18231586 |doi= 10.1371/journal.pone.0001499 }} |
*{{cite journal |author=Sun XJ, Xu PF, Zhou T, ''et al.'' |title=Genome-wide survey and developmental expression mapping of zebrafish SET domain-containing genes. |journal=PLoS ONE |volume=3 |issue= 1 |pages= e1499 |year= 2008 |pmid= 18231586 |doi= 10.1371/journal.pone.0001499 |pmc=2200798}} |
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*{{cite journal |author=Xiao B, Wilson JR, Gamblin SJ |title=SET domains and histone methylation. |journal=Curr. Opin. Struct. Biol. |volume=13 |issue= 6 |pages= 699–705 |year= 2003 |pmid= 14675547 |doi= 10.1016/j.sbi.2003.10.003 }} |
*{{cite journal |author=Xiao B, Wilson JR, Gamblin SJ |title=SET domains and histone methylation. |journal=Curr. Opin. Struct. Biol. |volume=13 |issue= 6 |pages= 699–705 |year= 2003 |pmid= 14675547 |doi= 10.1016/j.sbi.2003.10.003 }} |
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*{{cite journal |author=Wahls WP, Swenson G, Moore PD |title=Two hypervariable minisatellite DNA binding proteins. |journal=Nucleic Acids Res. |volume=19 |issue= 12 |pages= 3269–74 |year= 1991 |pmid= 2062643 |PMC=328321|doi= 10.1093/nar/19.12.3269 }} |
*{{cite journal |author=Wahls WP, Swenson G, Moore PD |title=Two hypervariable minisatellite DNA binding proteins. |journal=Nucleic Acids Res. |volume=19 |issue= 12 |pages= 3269–74 |year= 1991 |pmid= 2062643 |PMC=328321|doi= 10.1093/nar/19.12.3269 }} |
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*{{cite journal |author=Parvanov ED, Petkov PM, Paigen K |title=Prdm9 controls activation of mammalian recombination hotspots. |journal=Science |volume=327 |issue= 5967 |pages= 835 |year= 2010 |pmid= 20044538 |doi= 10.1126/science.1181495 |pmc=2821451}} |
*{{cite journal |author=Parvanov ED, Petkov PM, Paigen K |title=Prdm9 controls activation of mammalian recombination hotspots. |journal=Science |volume=327 |issue= 5967 |pages= 835 |year= 2010 |pmid= 20044538 |doi= 10.1126/science.1181495 |pmc=2821451}} |
||
*{{cite journal |author=Myers S, Bowden R, Tumian A, ''et al.'' |title=Drive against hotspot motifs in primates implicates the PRDM9 gene in meiotic recombination. |journal=Science |volume=327 |issue= 5967 |pages= 876–9 |year= 2010 |pmid= 20044541 |doi= 10.1126/science.1182363 }} |
*{{cite journal |author=Myers S, Bowden R, Tumian A, ''et al.'' |title=Drive against hotspot motifs in primates implicates the PRDM9 gene in meiotic recombination. |journal=Science |volume=327 |issue= 5967 |pages= 876–9 |year= 2010 |pmid= 20044541 |doi= 10.1126/science.1182363 }} |
||
*{{cite journal |author=Miyamoto T, Koh E, Sakugawa N, ''et al.'' |title=Two single nucleotide polymorphisms in PRDM9 (MEISETZ) gene may be a genetic risk factor for Japanese patients with azoospermia by meiotic arrest. |journal=J. Assist. Reprod. Genet. |volume=25 |issue= 11-12 |pages= 553–7 |year= |pmid= 18941885 |doi= 10.1007/s10815-008-9270-x }} |
*{{cite journal |author=Miyamoto T, Koh E, Sakugawa N, ''et al.'' |title=Two single nucleotide polymorphisms in PRDM9 (MEISETZ) gene may be a genetic risk factor for Japanese patients with azoospermia by meiotic arrest. |journal=J. Assist. Reprod. Genet. |volume=25 |issue= 11-12 |pages= 553–7 |year= 2008|pmid= 18941885 |doi= 10.1007/s10815-008-9270-x |pmc=2593767}} |
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*{{cite journal |author=Hussin J, Sinnett D, Casals F, ''et al.'' |title=Rare allelic forms of PRDM9 associated with childhood leukemogenesis. |journal=Genome Res. |volume=23 |issue= 3 |pages= 419-30 |year= 2013 |pmid= 23222848 |doi= 10.1101/gr.144188.112 }} |
*{{cite journal |author=Hussin J, Sinnett D, Casals F, ''et al.'' |title=Rare allelic forms of PRDM9 associated with childhood leukemogenesis. |journal=Genome Res. |volume=23 |issue= 3 |pages= 419-30 |year= 2013 |pmid= 23222848 |doi= 10.1101/gr.144188.112 }} |
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{{refend}} |
{{refend}} |
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Revision as of 13:33, 2 August 2014
PR domain[note 1] zinc finger protein 9 is a protein that in humans is encoded by the Prdm9 gene.[1] The protein has histone H3(K4) trimethyltransferase activity, a KRAB domain, and a DNA-binding domain consisting of multiple tandem C2H2 zinc finger (ZF) domains.[2] PRDM9 specifically trimethylates 'Lys-4' of histone H3 during meiotic prophase and is essential for proper meiotic progression, but does not have the ability to mono- and dimethylate 'Lys-4' of histone H3. H3 'Lys-4' methylation represents a specific tag for epigenetic transcriptional activation which plays a central role in the transcriptional activation of genes during early meiotic prophase.
Function
PRDM9 is thought to mediate the process of meiotic homologous recombination.[3]
Notes
- ^ positive-regulatory domain
References
- ^ "Entrez Gene: PR domain containing 9".
- ^ Thomas JH, Emerson RO, Shendure J (2009). "Extraordinary molecular evolution in the PRDM9 fertility gene". PLoS ONE. 4 (12): e8505. doi:10.1371/journal.pone.0008505. PMC 2794550. PMID 20041164.
{{cite journal}}: CS1 maint: multiple names: authors list (link) CS1 maint: unflagged free DOI (link) - ^ Smagulova F, Gregoretti IV, Brick K, Khil P, Camerini-Otero RD, Petukhova GV (April 2011). "Genome-wide analysis reveals novel molecular features of mouse recombination hotspots". Nature. 472 (7343): 375–8. doi:10.1038/nature09869. PMC 3117304. PMID 21460839.
{{cite journal}}: CS1 maint: multiple names: authors list (link)
Further reading
- Baudat F, Buard J, Grey C; et al. (2010). "PRDM9 is a major determinant of meiotic recombination hotspots in humans and mice". Science. 327 (5967): 836–40. doi:10.1126/science.1183439. PMID 20044539.
{{cite journal}}: Explicit use of et al. in:|author=(help)CS1 maint: multiple names: authors list (link) - Berg IL, Neumann R, Lam KW; et al. (2010). "PRDM9 variation strongly influences recombination hot-spot activity and meiotic instability in humans". Nat. Genet. 42 (10): 859–63. doi:10.1038/ng.658. PMC 3092422. PMID 20818382.
{{cite journal}}: Explicit use of et al. in:|author=(help)CS1 maint: multiple names: authors list (link) - Irie S, Tsujimura A, Miyagawa Y; et al. (2009). "Single-nucleotide polymorphisms of the PRDM9 (MEISETZ) gene in patients with nonobstructive azoospermia". J. Androl. 30 (4): 426–31. doi:10.2164/jandrol.108.006262. PMID 19168450.
{{cite journal}}: Explicit use of et al. in:|author=(help)CS1 maint: multiple names: authors list (link) - Sun XJ, Xu PF, Zhou T; et al. (2008). "Genome-wide survey and developmental expression mapping of zebrafish SET domain-containing genes". PLoS ONE. 3 (1): e1499. doi:10.1371/journal.pone.0001499. PMC 2200798. PMID 18231586.
{{cite journal}}: Explicit use of et al. in:|author=(help)CS1 maint: multiple names: authors list (link) CS1 maint: unflagged free DOI (link) - Xiao B, Wilson JR, Gamblin SJ (2003). "SET domains and histone methylation". Curr. Opin. Struct. Biol. 13 (6): 699–705. doi:10.1016/j.sbi.2003.10.003. PMID 14675547.
{{cite journal}}: CS1 maint: multiple names: authors list (link) - Wahls WP, Swenson G, Moore PD (1991). "Two hypervariable minisatellite DNA binding proteins". Nucleic Acids Res. 19 (12): 3269–74. doi:10.1093/nar/19.12.3269. PMC 328321. PMID 2062643.
{{cite journal}}: CS1 maint: multiple names: authors list (link) - Jiang GL, Huang S (2000). "The yin-yang of PR-domain family genes in tumorigenesis". Histol. Histopathol. 15 (1): 109–17. PMID 10668202.
- Parvanov ED, Petkov PM, Paigen K (2010). "Prdm9 controls activation of mammalian recombination hotspots". Science. 327 (5967): 835. doi:10.1126/science.1181495. PMC 2821451. PMID 20044538.
{{cite journal}}: CS1 maint: multiple names: authors list (link) - Myers S, Bowden R, Tumian A; et al. (2010). "Drive against hotspot motifs in primates implicates the PRDM9 gene in meiotic recombination". Science. 327 (5967): 876–9. doi:10.1126/science.1182363. PMID 20044541.
{{cite journal}}: Explicit use of et al. in:|author=(help)CS1 maint: multiple names: authors list (link) - Miyamoto T, Koh E, Sakugawa N; et al. (2008). "Two single nucleotide polymorphisms in PRDM9 (MEISETZ) gene may be a genetic risk factor for Japanese patients with azoospermia by meiotic arrest". J. Assist. Reprod. Genet. 25 (11–12): 553–7. doi:10.1007/s10815-008-9270-x. PMC 2593767. PMID 18941885.
{{cite journal}}: Explicit use of et al. in:|author=(help)CS1 maint: multiple names: authors list (link) - Hussin J, Sinnett D, Casals F; et al. (2013). "Rare allelic forms of PRDM9 associated with childhood leukemogenesis". Genome Res. 23 (3): 419–30. doi:10.1101/gr.144188.112. PMID 23222848.
{{cite journal}}: Explicit use of et al. in:|author=(help)CS1 maint: multiple names: authors list (link)
External links
- PRDM9+protein,+human at the U.S. National Library of Medicine Medical Subject Headings (MeSH)
- UCSC GenomeWiki - PRDM9: Meiosis and Recombination
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