Cytorhabdovirus: Difference between revisions

From Wikipedia, the free encyclopedia
Content deleted Content added
m Caps using AWB
 
(21 intermediate revisions by 15 users not shown)
Line 1: Line 1:
{{short description|Genus of plant viruses}}
{{Taxobox
{{Use dmy dates|date=April 2017}}
| virus_group = v
{{virusbox
| ordo = ''[[Mononegavirales]]''
| image = Fmicb-07-02140-g002-A.jpg
| familia = ''[[Rhabdoviridae]]''
| image2 = Viruses-11-00982-g003-A.jpg
| genus = '''''Cytorhabdovirus'''''
| image2_caption = [[Electron micrograph]] of rice stripe mosaic cytorhabdovirus and genome
| type_species = ''Lettuce necrotic yellows cytorhabdovirus''
| taxon = Cytorhabdovirus
| subdivision_ranks = [[Species]]
| subdivision =
*''Alfalfa dwarf cytorhabdovirus''
*''Barley yellow striate mosaic cytorhabdovirus''
*''Broccoli necrotic yellows cytorhabdovirus''
*''Festuca leaf streak cytorhabdovirus''
*''Lettuce necrotic yellows cytorhabdovirus''
*''Lettuce yellow mottle cytorhabdovirus''
*''Northern cereal mosaic cytorhabdovirus''
*''Sonchus cytorhabdovirus''
*''Strawberry crinkle cytorhabdovirus''
*''Wheat American striate mosaic cytorhabdovirus'''
}}
}}


'''''Cytorhabdovirus''''' is a genus of [[viruses]] in the family ''[[Rhabdoviridae]]'', order ''[[Mononegavirales]]''. Plants serve as natural hosts.<ref name=ViralZone>{{cite web|title=Viral Zone|url=http://viralzone.expasy.org/all_by_species/77.html|publisher=ExPASy|accessdate=15 June 2015}}</ref><ref name=ICTV>{{cite web|last1=ICTV|title=Virus Taxonomy: 2014 Release|url=http://ictvonline.org/virusTaxonomy.asp|accessdate=15 June 2015}}</ref>
'''''Cytorhabdovirus''''' is a genus of [[viruses]] in the family ''[[Rhabdoviridae]]'',<ref name="ICTVProfile">{{cite journal|last1=Walker|first1=PJ|last2=Blasdell|first2=KR|author3-link=Charles Calisher|last3=Calisher|first3=CH|last4=Dietzgen|first4=RG|last5=Kondo|first5=H|last6=Kurath|first6=G|last7=Longdon|first7=B|last8=Stone|first8=DM|last9=Tesh|first9=RB|last10=Tordo|first10=N|last11=Vasilakis|first11=N|last12=Whitfield|first12=AE|last13=Ictv Report|first13=Consortium|title=ICTV Virus Taxonomy Profile: Rhabdoviridae.|journal=The Journal of General Virology|volume=99|issue=4|pages=447–448|date=19 February 2018|doi=10.1099/jgv.0.001020|pmid=29465028|doi-access=free|hdl=10871/31776|hdl-access=free}}</ref> order ''[[Mononegavirales]]''. Plants serve as natural hosts.<ref name="ICTVReport">{{cite web|title=ICTV Online Report ''Rhabdoviridae''|url=http://www.ictv.global/report/rhabdoviridae|language=en}}</ref><ref name=ViralZone>{{cite web|title=Viral Zone|url=http://viralzone.expasy.org/all_by_species/77.html|publisher=ExPASy|accessdate=15 June 2015}}</ref>

==Taxonomy==
{| class="sortable wikitable"
|+ Genus ''Cytorhabdovirus'': species and their viruses<ref>{{Cite journal|last=Afonso|first=Claudio L.|last2=Amarasinghe|first2=Gaya K.|last3=Bányai|first3=Krisztián|last4=Bào|first4=Yīmíng|last5=Basler|first5=Christopher F.|last6=Bavari|first6=Sina|last7=Bejerman|first7=Nicolás|last8=Blasdell|first8=Kim R.|last9=Briand|first9=François-Xavier|date=2016-08-01|title=Taxonomy of the order Mononegavirales: update 2016|journal=Archives of Virology|volume=161|issue=8|pages=2351–2360|doi=10.1007/s00705-016-2880-1|issn=1432-8798|pmc=4947412|pmid=27216929}}</ref>
|-
| '''[[International Committee on Taxonomy of Viruses|Genus]]'''
| '''[[International Committee on Taxonomy of Viruses|Species]]'''
| '''[[International Committee on Taxonomy of Viruses|Virus (Abbreviation)]]'''
|- valign="TOP"
| rowspan="10" | ''Cytorhabdovirus''
| rowspan="1" | ''Alfalfa dwarf cytorhabdovirus''
| rowspan="1" | alfalfa dwarf virus (ADV)
|- valign="TOP"
| rowspan="1" | ''[[barley yellow striate mosaic virus|Barley yellow striate mosaic cytorhabdovirus]]''
| rowspan="1" | [[barley yellow striate mosaic virus|barley yellow striate mosaic virus (BYSMV)]]
|- valign="TOP"
| rowspan="1" | ''[[broccoli necrotic yellows virus|Broccoli necrotic yellows cytorhabdovirus]]''
| rowspan="1" | [[broccoli necrotic yellows virus|broccoli necrotic yellows virus (BNYV)]]
|- valign="TOP"
| rowspan="1" | ''Festuca leaf streak cytorhabdovirus''
| rowspan="1" | festuca leaf streak virus (FLSV)
|- valign="TOP"
| rowspan="1" | ''[[lettuce necrotic yellows virus|Lettuce necrotic yellows cytorhabdovirus]]''*
| rowspan="1" | [[lettuce necrotic yellows virus|lettuce necrotic yellows virus (LNYV)]]
|- valign="TOP"
| rowspan="1" | ''Lettuce yellow mottle cytorhabdovirus''
| rowspan="1" | lettuce yellow mottle virus (LYMoV)
|- valign="TOP"
| rowspan="1" | ''[[northern cereal mosaic virus|Northern cereal mosaic cytorhabdovirus]]''
| rowspan="1" | [[northern cereal mosaic virus|northern cereal mosaic virus (NCMV)]]
|- valign="TOP"
| rowspan="1" | ''Sonchus cytorhabdovirus''
| rowspan="1" | sonchus virus (SonV)
|- valign="TOP"
| rowspan="1" | ''[[strawberry crinkle virus|Strawberry crinkle cytorhabdovirus]]''
| rowspan="1" | [[strawberry crinkle virus|strawberry crinkle virus (SCV)]]
|- valign="TOP"
| rowspan="1" | ''Wheat American striate mosaic cytorhabdovirus''
| rowspan="1" | wheat American striate mosaic virus (WASMV)
|- valign="TOP"
|}
Table legend: "*" denotes type species.


==Structure==
==Structure==
Cytorhabdovirions are enveloped, with bullet shaped and bacilliform geometries. These virions are about 75&nbsp;nm wide and 180&nbsp;nm long. Cytorhabdovirus genomes are linear, around 13 kb in length.<ref name=ViralZone />
Cytorhabdovirions are enveloped, with bullet shaped and bacilliform geometries. These virions are about 75&nbsp;nm wide and 180&nbsp;nm long.<ref name="ICTVReport" /><ref name="ViralZone" />


==Genome==
{| class="wikitable sortable" style="text-align:center"
Cytorhabdovirus genomes are linear and around 13 kb in length.<ref name="ICTVReport" /><ref name="ViralZone" />
|-
! Genus !! Structure || Symmetry !! Capsid !! Genomic Arrangement !! Genomic Segmentation
|-
|''Cytorhabdovirus''||Bullet-shaped||||Enveloped||Linear||Monopartite
|}


==Life Cycle==
==Life cycle==
Viral replication is cytoplasmic. Entry into the host cell is achieved by attachment of the viral G glycoproteins to host receptors, which mediates endocytosis. Replication follows the negative stranded RNA virus replication model. Negative stranded rna virus transcription, using polymerase stuttering is the method of transcription. The virus exits the host cell by budding, and tubule-guided viral movement.
Viral replication is cytoplasmic. Entry into the host cell is achieved by attachment of the viral G glycoproteins to host receptors, which mediates endocytosis. Replication follows the negative stranded RNA virus replication model. Negative stranded RNA virus transcription, using polymerase stuttering is the method of transcription. The virus exits the host cell by budding, and tubule-guided viral movement. Plants serve as the natural host. The virus is transmitted via a vector (insect aphid, leafhopper, planthopper, and insect). Transmission routes are vectors.<ref name="ICTVReport" /><ref name="ViralZone" />
Plants serve as the natural host. The virus is transmitted via a vector (insect aphid, leafhopper, planthopper, and insect). Transmission routes are vector.<ref name=ViralZone />


== Taxonomy ==
{| class="wikitable sortable" style="text-align:center"

|-
The following species are recognized:<ref>{{cite web |title=Virus Taxonomy: 2022 Release |url=https://ictv.global/taxonomy |publisher=International Committee on Taxonomy of Viruses (ICTV) |date=March 2023 |access-date=14 Sep 2023}}</ref>
! Genus !! Host details !! Tissue tropism !! Entry details !! Release details !! Replication site !! Assembly site !! Transmission
[[File:Viruses-11-00982-g003.png|thumb|Phylogenetic tree and genome of cytorhabdoviruses]]
|-
(New name after 2021; old name before 2021)
|''Cytorhabdovirus''||Humans; cattle; rodents||None||Clathrin-mediated endocytosis; viral movement; mechanical innoculation||Budding; viral movement||Cytoplasm||Cytoplasm||Mechanical innoculation: aphid; mechanical innoculation: leafhopper; mechanical innoculation: planthopper

|}
{{div col|colwidth=20em}}
# ''[[Cytorhabdovirus actinidiae]]''
# ''[[Cytorhabdovirus alphatrifolii]]''; ''[[Trifolium pratense cytorhabdovirus A]]''
# ''[[Cytorhabdovirus alphawuhaninsectum]]''; ''[[Wuhan 4 insect cytorhabdovirus]]''
# ''[[Cytorhabdovirus anthurii]]''
# ''[[Cytorhabdovirus asclepiadis]]''
# ''[[Cytorhabdovirus bacopae]]''
# ''[[Cytorhabdovirus bemisiae]]''
# ''[[Cytorhabdovirus betatrifolii]]''; ''[[Trifolium pratense cytorhabdovirus B]]''
# ''[[Cytorhabdovirus betawuhaninsectum]]''; ''[[Wuhan 5 insect cytorhabdovirus]]''
# ''[[Cytorhabdovirus brassicae]]''; ''[[Broccoli necrotic yellows cytorhabdovirus]]''
# ''[[Cytorhabdovirus brassicicolae]]''; ''[[Cabbage cytorhabdovirus]]''
# ''[[Cytorhabdovirus broussonetiae]]''
# ''[[Cytorhabdovirus caricae]]''; ''[[Papaya cytorhabdovirus]]''
# ''[[Cytorhabdovirus chrysanthemi]]''
# ''[[Cytorhabdovirus colocasiae]]''; ''[[Colocasia bobone disease-associated cytorhabdovirus]]''
# ''[[Cytorhabdovirus cucurbitae]]''
# ''[[Cytorhabdovirus festucae]]''; ''[[Festuca leaf streak cytorhabdovirus]]''
# ''[[Cytorhabdovirus flaviyerbamate]]''; ''[[Yerba mate chlorosis-associated cytorhabdovirus]]''
# ''[[Cytorhabdovirus fragariae]]''; ''[[Strawberry cytorhabdovirus 1]]''
# ''[[Cytorhabdovirus fragariarugosus]]''; ''[[Strawberry crinkle cytorhabdovirus]]''
# ''[[Cytorhabdovirus gammawuhaninsectum]]''; ''[[Wuhan 6 insect cytorhabdovirus]]''
# ''[[Cytorhabdovirus glehniae]]''
# ''[[Cytorhabdovirus gramineae]]''; ''[[Northern cereal mosaic cytorhabdovirus]]''
# ''[[Cytorhabdovirus hordei]]''; ''[[Barley yellow striate mosaic cytorhabdovirus]]''
# ''[[Cytorhabdovirus kenyatuberosum]]''
# ''[[Cytorhabdovirus lactucamaculante]]''; ''[[Lettuce yellow mottle cytorhabdovirus]]''
# ''[[Cytorhabdovirus lactucanecante]]''; ''[[Lettuce necrotic yellows cytorhabdovirus]]''
# ''[[Cytorhabdovirus lycopersici]]''; ''[[Tomato yellow mottle-associated cytorhabdovirus]]''
# ''[[Cytorhabdovirus maydis]]''; ''[[Maize-associated cytorhabdovirus]]''
# ''[[Cytorhabdovirus maysflavostriatis]]''; ''[[Maize yellow striate cytorhabdovirus]]''
# ''[[Cytorhabdovirus medicagonis]]''; ''[[Alfalfa dwarf cytorhabdovirus]]''
# ''[[Cytorhabdovirus nymphaeae]]''
# ''[[Cytorhabdovirus orchidaceae]]''
# ''[[Cytorhabdovirus oryzae]]''; ''[[Rice stripe mosaic cytorhabdovirus]]''
# ''[[Cytorhabdovirus persimmon]]''; ''[[Persimmon cytorhabdovirus]]''
# ''[[Cytorhabdovirus rosae]]''
# ''[[Cytorhabdovirus rubus]]''; ''[[Raspberry vein chlorosis cytorhabdovirus]]''
# ''[[Cytorhabdovirus sonchi]]''; ''[[Sonchus cytorhabdovirus 1]]''
# ''[[Cytorhabdovirus tagetis]]''
# ''[[Cytorhabdovirus trachyspermi]]''
# ''[[Cytorhabdovirus trichosanthei]]''; ''[[Trichosanthes cytorhabdovirus]]''
# ''[[Cytorhabdovirus tritici]]''; ''[[Wheat American striate mosaic cytorhabdovirus]]''
# ''[[Cytorhabdovirus yerbamate]]''; ''[[Yerba mate cytorhabdovirus]]''
{{div col end}}


==References==
==References==
Line 88: Line 75:


==External links==
==External links==
* [http://viralzone.expasy.org/all_by_species/77.html '''Viralzone''': Cytorhabdovirus]
* [http://viralzone.expasy.org/all_by_species/77.html Viralzone: Cytorhabdovirus]
* [http://www.ictv.global/report/rhabdoviridae ICTV Online Report ''Rhabdoviridae'']
* [http://ictvonline.org/virusTaxonomy.asp '''ICTV''']
{{Baltimore classification}}
{{Baltimore classification}}

{{Use dmy dates|date=April 2017}}
{{Taxonbar|from=Q16913567}}


[[Category:Rhabdoviridae]]
[[Category:Rhabdoviridae]]
[[Category:Mononegavirales]]
[[Category:Virus genera]]

Latest revision as of 09:57, 8 April 2024

Cytorhabdovirus
Electron micrograph of rice stripe mosaic cytorhabdovirus and genome
Virus classification Edit this classification
(unranked): Virus
Realm: Riboviria
Kingdom: Orthornavirae
Phylum: Negarnaviricota
Class: Monjiviricetes
Order: Mononegavirales
Family: Rhabdoviridae
Subfamily: Betarhabdovirinae
Genus: Cytorhabdovirus

Cytorhabdovirus is a genus of viruses in the family Rhabdoviridae,[1] order Mononegavirales. Plants serve as natural hosts.[2][3]

Structure[edit]

Cytorhabdovirions are enveloped, with bullet shaped and bacilliform geometries. These virions are about 75 nm wide and 180 nm long.[2][3]

Genome[edit]

Cytorhabdovirus genomes are linear and around 13 kb in length.[2][3]

Life cycle[edit]

Viral replication is cytoplasmic. Entry into the host cell is achieved by attachment of the viral G glycoproteins to host receptors, which mediates endocytosis. Replication follows the negative stranded RNA virus replication model. Negative stranded RNA virus transcription, using polymerase stuttering is the method of transcription. The virus exits the host cell by budding, and tubule-guided viral movement. Plants serve as the natural host. The virus is transmitted via a vector (insect aphid, leafhopper, planthopper, and insect). Transmission routes are vectors.[2][3]

Taxonomy[edit]

The following species are recognized:[4]

Phylogenetic tree and genome of cytorhabdoviruses

(New name after 2021; old name before 2021)

  1. Cytorhabdovirus actinidiae
  2. Cytorhabdovirus alphatrifolii; Trifolium pratense cytorhabdovirus A
  3. Cytorhabdovirus alphawuhaninsectum; Wuhan 4 insect cytorhabdovirus
  4. Cytorhabdovirus anthurii
  5. Cytorhabdovirus asclepiadis
  6. Cytorhabdovirus bacopae
  7. Cytorhabdovirus bemisiae
  8. Cytorhabdovirus betatrifolii; Trifolium pratense cytorhabdovirus B
  9. Cytorhabdovirus betawuhaninsectum; Wuhan 5 insect cytorhabdovirus
  10. Cytorhabdovirus brassicae; Broccoli necrotic yellows cytorhabdovirus
  11. Cytorhabdovirus brassicicolae; Cabbage cytorhabdovirus
  12. Cytorhabdovirus broussonetiae
  13. Cytorhabdovirus caricae; Papaya cytorhabdovirus
  14. Cytorhabdovirus chrysanthemi
  15. Cytorhabdovirus colocasiae; Colocasia bobone disease-associated cytorhabdovirus
  16. Cytorhabdovirus cucurbitae
  17. Cytorhabdovirus festucae; Festuca leaf streak cytorhabdovirus
  18. Cytorhabdovirus flaviyerbamate; Yerba mate chlorosis-associated cytorhabdovirus
  19. Cytorhabdovirus fragariae; Strawberry cytorhabdovirus 1
  20. Cytorhabdovirus fragariarugosus; Strawberry crinkle cytorhabdovirus
  21. Cytorhabdovirus gammawuhaninsectum; Wuhan 6 insect cytorhabdovirus
  22. Cytorhabdovirus glehniae
  23. Cytorhabdovirus gramineae; Northern cereal mosaic cytorhabdovirus
  24. Cytorhabdovirus hordei; Barley yellow striate mosaic cytorhabdovirus
  25. Cytorhabdovirus kenyatuberosum
  26. Cytorhabdovirus lactucamaculante; Lettuce yellow mottle cytorhabdovirus
  27. Cytorhabdovirus lactucanecante; Lettuce necrotic yellows cytorhabdovirus
  28. Cytorhabdovirus lycopersici; Tomato yellow mottle-associated cytorhabdovirus
  29. Cytorhabdovirus maydis; Maize-associated cytorhabdovirus
  30. Cytorhabdovirus maysflavostriatis; Maize yellow striate cytorhabdovirus
  31. Cytorhabdovirus medicagonis; Alfalfa dwarf cytorhabdovirus
  32. Cytorhabdovirus nymphaeae
  33. Cytorhabdovirus orchidaceae
  34. Cytorhabdovirus oryzae; Rice stripe mosaic cytorhabdovirus
  35. Cytorhabdovirus persimmon; Persimmon cytorhabdovirus
  36. Cytorhabdovirus rosae
  37. Cytorhabdovirus rubus; Raspberry vein chlorosis cytorhabdovirus
  38. Cytorhabdovirus sonchi; Sonchus cytorhabdovirus 1
  39. Cytorhabdovirus tagetis
  40. Cytorhabdovirus trachyspermi
  41. Cytorhabdovirus trichosanthei; Trichosanthes cytorhabdovirus
  42. Cytorhabdovirus tritici; Wheat American striate mosaic cytorhabdovirus
  43. Cytorhabdovirus yerbamate; Yerba mate cytorhabdovirus

References[edit]

  1. ^ Walker, PJ; Blasdell, KR; Calisher, CH; Dietzgen, RG; Kondo, H; Kurath, G; Longdon, B; Stone, DM; Tesh, RB; Tordo, N; Vasilakis, N; Whitfield, AE; Ictv Report, Consortium (19 February 2018). "ICTV Virus Taxonomy Profile: Rhabdoviridae". The Journal of General Virology. 99 (4): 447–448. doi:10.1099/jgv.0.001020. hdl:10871/31776. PMID 29465028.
  2. ^ a b c d "ICTV Online Report Rhabdoviridae".
  3. ^ a b c d "Viral Zone". ExPASy. Retrieved 15 June 2015.
  4. ^ "Virus Taxonomy: 2022 Release". International Committee on Taxonomy of Viruses (ICTV). March 2023. Retrieved 14 September 2023.

External links[edit]