Cytorhabdovirus: Difference between revisions
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{{short description|Genus of plant viruses}} |
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{{Use dmy dates|date=April 2017}} |
{{Use dmy dates|date=April 2017}} |
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{{virusbox |
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{{Taxobox |
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| image = Fmicb-07-02140-g002-A.jpg |
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| virus_group = v |
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| image2 = Viruses-11-00982-g003-A.jpg |
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| ordo = ''[[Mononegavirales]]'' |
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| image2_caption = [[Electron micrograph]] of rice stripe mosaic cytorhabdovirus and genome |
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| familia = ''[[Rhabdoviridae]]'' |
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| taxon = Cytorhabdovirus |
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| type_species = ''Lettuce necrotic yellows cytorhabdovirus'' |
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| subdivision_ranks = [[Species]] |
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| subdivision = |
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*''Alfalfa dwarf cytorhabdovirus'' |
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*''Barley yellow striate mosaic cytorhabdovirus'' |
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*''Broccoli necrotic yellows cytorhabdovirus'' |
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*''Festuca leaf streak cytorhabdovirus'' |
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*''Lettuce necrotic yellows cytorhabdovirus'' |
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*''Lettuce yellow mottle cytorhabdovirus'' |
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*''Northern cereal mosaic cytorhabdovirus'' |
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*''Sonchus cytorhabdovirus'' |
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*''Strawberry crinkle cytorhabdovirus'' |
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*''Wheat American striate mosaic cytorhabdovirus''' |
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}} |
}} |
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'''''Cytorhabdovirus''''' is a genus of [[viruses]] in the family ''[[Rhabdoviridae]]'',<ref name="ICTVProfile">{{cite journal|last1=Walker|first1=PJ|last2=Blasdell|first2=KR|last3=Calisher|first3=CH|last4=Dietzgen|first4=RG|last5=Kondo|first5=H|last6=Kurath|first6=G|last7=Longdon|first7=B|last8=Stone|first8=DM|last9=Tesh|first9=RB|last10=Tordo|first10=N|last11=Vasilakis|first11=N|last12=Whitfield|first12=AE|last13=Ictv Report|first13=Consortium|title=ICTV Virus Taxonomy Profile: Rhabdoviridae.|journal=The Journal of General Virology|volume=99|issue=4|pages=447–448|date=19 February 2018|doi=10.1099/jgv.0.001020|pmid=29465028}}</ref> order ''[[Mononegavirales]]''. Plants serve as natural hosts.<ref name="ICTVReport">{{cite web|title=ICTV Online Report ''Rhabdoviridae''|url=http://www.ictv.global/report/rhabdoviridae|language=en}}</ref><ref name=ViralZone>{{cite web|title=Viral Zone|url=http://viralzone.expasy.org/all_by_species/77.html|publisher=ExPASy|accessdate=15 June 2015}}</ref> |
'''''Cytorhabdovirus''''' is a genus of [[viruses]] in the family ''[[Rhabdoviridae]]'',<ref name="ICTVProfile">{{cite journal|last1=Walker|first1=PJ|last2=Blasdell|first2=KR|author3-link=Charles Calisher|last3=Calisher|first3=CH|last4=Dietzgen|first4=RG|last5=Kondo|first5=H|last6=Kurath|first6=G|last7=Longdon|first7=B|last8=Stone|first8=DM|last9=Tesh|first9=RB|last10=Tordo|first10=N|last11=Vasilakis|first11=N|last12=Whitfield|first12=AE|last13=Ictv Report|first13=Consortium|title=ICTV Virus Taxonomy Profile: Rhabdoviridae.|journal=The Journal of General Virology|volume=99|issue=4|pages=447–448|date=19 February 2018|doi=10.1099/jgv.0.001020|pmid=29465028|doi-access=free|hdl=10871/31776|hdl-access=free}}</ref> order ''[[Mononegavirales]]''. Plants serve as natural hosts.<ref name="ICTVReport">{{cite web|title=ICTV Online Report ''Rhabdoviridae''|url=http://www.ictv.global/report/rhabdoviridae|language=en}}</ref><ref name=ViralZone>{{cite web|title=Viral Zone|url=http://viralzone.expasy.org/all_by_species/77.html|publisher=ExPASy|accessdate=15 June 2015}}</ref> |
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==Taxonomy== |
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{| class="sortable wikitable" |
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|+ Genus ''Cytorhabdovirus'': species and their viruses<ref>{{Cite journal|last=Afonso|first=Claudio L.|last2=Amarasinghe|first2=Gaya K.|last3=Bányai|first3=Krisztián|last4=Bào|first4=Yīmíng|last5=Basler|first5=Christopher F.|last6=Bavari|first6=Sina|last7=Bejerman|first7=Nicolás|last8=Blasdell|first8=Kim R.|last9=Briand|first9=François-Xavier|date=2016-08-01|title=Taxonomy of the order Mononegavirales: update 2016|journal=Archives of Virology|volume=161|issue=8|pages=2351–2360|doi=10.1007/s00705-016-2880-1|issn=1432-8798|pmc=4947412|pmid=27216929}}</ref><ref name=ICTVReport/> |
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|- |
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| '''[[International Committee on Taxonomy of Viruses|Genus]]''' |
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| '''[[International Committee on Taxonomy of Viruses|Species]]''' |
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| '''[[International Committee on Taxonomy of Viruses|Virus (Abbreviation)]]''' |
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|- valign="TOP" |
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| rowspan="10" | ''Cytorhabdovirus'' |
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| rowspan="1" | ''Alfalfa dwarf cytorhabdovirus'' |
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| rowspan="1" | alfalfa dwarf virus (ADV) |
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|- valign="TOP" |
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| rowspan="1" | ''[[barley yellow striate mosaic virus|Barley yellow striate mosaic cytorhabdovirus]]'' |
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| rowspan="1" | [[barley yellow striate mosaic virus|barley yellow striate mosaic virus (BYSMV)]] |
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|- valign="TOP" |
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| rowspan="1" | ''[[broccoli necrotic yellows virus|Broccoli necrotic yellows cytorhabdovirus]]'' |
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| rowspan="1" | [[broccoli necrotic yellows virus|broccoli necrotic yellows virus (BNYV)]] |
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|- valign="TOP" |
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| rowspan="1" | ''Festuca leaf streak cytorhabdovirus'' |
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| rowspan="1" | festuca leaf streak virus (FLSV) |
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|- valign="TOP" |
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| rowspan="1" | ''[[lettuce necrotic yellows virus|Lettuce necrotic yellows cytorhabdovirus]]''* |
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| rowspan="1" | [[lettuce necrotic yellows virus|lettuce necrotic yellows virus (LNYV)]] |
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|- valign="TOP" |
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| rowspan="1" | ''Lettuce yellow mottle cytorhabdovirus'' |
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| rowspan="1" | lettuce yellow mottle virus (LYMoV) |
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|- valign="TOP" |
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| rowspan="1" | ''[[northern cereal mosaic virus|Northern cereal mosaic cytorhabdovirus]]'' |
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| rowspan="1" | [[northern cereal mosaic virus|northern cereal mosaic virus (NCMV)]] |
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|- valign="TOP" |
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| rowspan="1" | ''Sonchus cytorhabdovirus'' |
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| rowspan="1" | sonchus virus (SonV) |
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|- valign="TOP" |
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| rowspan="1" | ''[[strawberry crinkle virus|Strawberry crinkle cytorhabdovirus]]'' |
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| rowspan="1" | [[strawberry crinkle virus|strawberry crinkle virus (SCV)]] |
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|- valign="TOP" |
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| rowspan="1" | ''Wheat American striate mosaic cytorhabdovirus'' |
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| rowspan="1" | wheat American striate mosaic virus (WASMV) |
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|- valign="TOP" |
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|} |
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Table legend: "*" denotes type species. |
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==Structure== |
==Structure== |
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Cytorhabdovirions are enveloped, with bullet shaped and bacilliform geometries. These virions are about 75 nm wide and 180 nm long |
Cytorhabdovirions are enveloped, with bullet shaped and bacilliform geometries. These virions are about 75 nm wide and 180 nm long.<ref name="ICTVReport" /><ref name="ViralZone" /> |
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==Genome== |
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{| class="wikitable sortable" style="text-align:center" |
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Cytorhabdovirus genomes are linear and around 13 kb in length.<ref name="ICTVReport" /><ref name="ViralZone" /> |
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|- |
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! Genus !! Structure || Symmetry !! Capsid !! Genomic arrangement !! Genomic segmentation |
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|- |
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|''Cytorhabdovirus''||Bullet-shaped||||Enveloped||Linear||Monopartite |
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|} |
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==Life cycle== |
==Life cycle== |
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Viral replication is cytoplasmic. Entry into the host cell is achieved by attachment of the viral G glycoproteins to host receptors, which mediates endocytosis. Replication follows the negative stranded RNA virus replication model. Negative stranded |
Viral replication is cytoplasmic. Entry into the host cell is achieved by attachment of the viral G glycoproteins to host receptors, which mediates endocytosis. Replication follows the negative stranded RNA virus replication model. Negative stranded RNA virus transcription, using polymerase stuttering is the method of transcription. The virus exits the host cell by budding, and tubule-guided viral movement. Plants serve as the natural host. The virus is transmitted via a vector (insect aphid, leafhopper, planthopper, and insect). Transmission routes are vectors.<ref name="ICTVReport" /><ref name="ViralZone" /> |
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Plants serve as the natural host. The virus is transmitted via a vector (insect aphid, leafhopper, planthopper, and insect). Transmission routes are vector.<ref name=ICTVReport/><ref name=ViralZone /> |
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== Taxonomy == |
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The following species are recognized:<ref>{{cite web |title=Virus Taxonomy: 2022 Release |url=https://ictv.global/taxonomy |publisher=International Committee on Taxonomy of Viruses (ICTV) |date=March 2023 |access-date=14 Sep 2023}}</ref> |
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[[File:Viruses-11-00982-g003.png|thumb|Phylogenetic tree and genome of cytorhabdoviruses]] |
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(New name after 2021; old name before 2021) |
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{{div col|colwidth=20em}} |
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{| class="wikitable sortable" style="text-align:center" |
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# ''[[Cytorhabdovirus actinidiae]]'' |
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|- |
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# ''[[Cytorhabdovirus alphatrifolii]]''; ''[[Trifolium pratense cytorhabdovirus A]]'' |
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! Genus !! Host details !! Tissue tropism !! Entry details !! Release details !! Replication site !! Assembly site !! Transmission |
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# ''[[Cytorhabdovirus alphawuhaninsectum]]''; ''[[Wuhan 4 insect cytorhabdovirus]]'' |
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|- |
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# ''[[Cytorhabdovirus anthurii]]'' |
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|''Cytorhabdovirus''||Humans; cattle; rodents||None||Clathrin-mediated endocytosis; viral movement; mechanical inoculation||Budding; viral movement||Cytoplasm||Cytoplasm||Mechanical inoculation: aphid; mechanical inoculation: leafhopper; mechanical inoculation: planthopper |
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# ''[[Cytorhabdovirus asclepiadis]]'' |
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|} |
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# ''[[Cytorhabdovirus bacopae]]'' |
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# ''[[Cytorhabdovirus bemisiae]]'' |
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# ''[[Cytorhabdovirus betatrifolii]]''; ''[[Trifolium pratense cytorhabdovirus B]]'' |
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# ''[[Cytorhabdovirus betawuhaninsectum]]''; ''[[Wuhan 5 insect cytorhabdovirus]]'' |
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# ''[[Cytorhabdovirus brassicae]]''; ''[[Broccoli necrotic yellows cytorhabdovirus]]'' |
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# ''[[Cytorhabdovirus brassicicolae]]''; ''[[Cabbage cytorhabdovirus]]'' |
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# ''[[Cytorhabdovirus broussonetiae]]'' |
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# ''[[Cytorhabdovirus caricae]]''; ''[[Papaya cytorhabdovirus]]'' |
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# ''[[Cytorhabdovirus chrysanthemi]]'' |
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# ''[[Cytorhabdovirus colocasiae]]''; ''[[Colocasia bobone disease-associated cytorhabdovirus]]'' |
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# ''[[Cytorhabdovirus cucurbitae]]'' |
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# ''[[Cytorhabdovirus festucae]]''; ''[[Festuca leaf streak cytorhabdovirus]]'' |
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# ''[[Cytorhabdovirus flaviyerbamate]]''; ''[[Yerba mate chlorosis-associated cytorhabdovirus]]'' |
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# ''[[Cytorhabdovirus fragariae]]''; ''[[Strawberry cytorhabdovirus 1]]'' |
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# ''[[Cytorhabdovirus fragariarugosus]]''; ''[[Strawberry crinkle cytorhabdovirus]]'' |
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# ''[[Cytorhabdovirus gammawuhaninsectum]]''; ''[[Wuhan 6 insect cytorhabdovirus]]'' |
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# ''[[Cytorhabdovirus glehniae]]'' |
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# ''[[Cytorhabdovirus gramineae]]''; ''[[Northern cereal mosaic cytorhabdovirus]]'' |
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# ''[[Cytorhabdovirus hordei]]''; ''[[Barley yellow striate mosaic cytorhabdovirus]]'' |
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# ''[[Cytorhabdovirus kenyatuberosum]]'' |
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# ''[[Cytorhabdovirus lactucamaculante]]''; ''[[Lettuce yellow mottle cytorhabdovirus]]'' |
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# ''[[Cytorhabdovirus lactucanecante]]''; ''[[Lettuce necrotic yellows cytorhabdovirus]]'' |
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# ''[[Cytorhabdovirus lycopersici]]''; ''[[Tomato yellow mottle-associated cytorhabdovirus]]'' |
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# ''[[Cytorhabdovirus maydis]]''; ''[[Maize-associated cytorhabdovirus]]'' |
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# ''[[Cytorhabdovirus maysflavostriatis]]''; ''[[Maize yellow striate cytorhabdovirus]]'' |
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# ''[[Cytorhabdovirus medicagonis]]''; ''[[Alfalfa dwarf cytorhabdovirus]]'' |
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# ''[[Cytorhabdovirus nymphaeae]]'' |
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# ''[[Cytorhabdovirus orchidaceae]]'' |
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# ''[[Cytorhabdovirus oryzae]]''; ''[[Rice stripe mosaic cytorhabdovirus]]'' |
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# ''[[Cytorhabdovirus persimmon]]''; ''[[Persimmon cytorhabdovirus]]'' |
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# ''[[Cytorhabdovirus rosae]]'' |
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# ''[[Cytorhabdovirus rubus]]''; ''[[Raspberry vein chlorosis cytorhabdovirus]]'' |
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# ''[[Cytorhabdovirus sonchi]]''; ''[[Sonchus cytorhabdovirus 1]]'' |
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# ''[[Cytorhabdovirus tagetis]]'' |
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# ''[[Cytorhabdovirus trachyspermi]]'' |
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# ''[[Cytorhabdovirus trichosanthei]]''; ''[[Trichosanthes cytorhabdovirus]]'' |
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# ''[[Cytorhabdovirus tritici]]''; ''[[Wheat American striate mosaic cytorhabdovirus]]'' |
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# ''[[Cytorhabdovirus yerbamate]]''; ''[[Yerba mate cytorhabdovirus]]'' |
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{{div col end}} |
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==References== |
==References== |
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==External links== |
==External links== |
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* [http://viralzone.expasy.org/all_by_species/77.html |
* [http://viralzone.expasy.org/all_by_species/77.html Viralzone: Cytorhabdovirus] |
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* [http://www.ictv.global/report/rhabdoviridae |
* [http://www.ictv.global/report/rhabdoviridae ICTV Online Report ''Rhabdoviridae''] |
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{{Baltimore classification}} |
{{Baltimore classification}} |
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[[Category:Rhabdoviridae]] |
[[Category:Rhabdoviridae]] |
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[[Category: |
[[Category:Virus genera]] |
Latest revision as of 09:57, 8 April 2024
Cytorhabdovirus | |
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Electron micrograph of rice stripe mosaic cytorhabdovirus and genome | |
Virus classification | |
(unranked): | Virus |
Realm: | Riboviria |
Kingdom: | Orthornavirae |
Phylum: | Negarnaviricota |
Class: | Monjiviricetes |
Order: | Mononegavirales |
Family: | Rhabdoviridae |
Subfamily: | Betarhabdovirinae |
Genus: | Cytorhabdovirus |
Cytorhabdovirus is a genus of viruses in the family Rhabdoviridae,[1] order Mononegavirales. Plants serve as natural hosts.[2][3]
Structure[edit]
Cytorhabdovirions are enveloped, with bullet shaped and bacilliform geometries. These virions are about 75 nm wide and 180 nm long.[2][3]
Genome[edit]
Cytorhabdovirus genomes are linear and around 13 kb in length.[2][3]
Life cycle[edit]
Viral replication is cytoplasmic. Entry into the host cell is achieved by attachment of the viral G glycoproteins to host receptors, which mediates endocytosis. Replication follows the negative stranded RNA virus replication model. Negative stranded RNA virus transcription, using polymerase stuttering is the method of transcription. The virus exits the host cell by budding, and tubule-guided viral movement. Plants serve as the natural host. The virus is transmitted via a vector (insect aphid, leafhopper, planthopper, and insect). Transmission routes are vectors.[2][3]
Taxonomy[edit]
The following species are recognized:[4]
(New name after 2021; old name before 2021)
- Cytorhabdovirus actinidiae
- Cytorhabdovirus alphatrifolii; Trifolium pratense cytorhabdovirus A
- Cytorhabdovirus alphawuhaninsectum; Wuhan 4 insect cytorhabdovirus
- Cytorhabdovirus anthurii
- Cytorhabdovirus asclepiadis
- Cytorhabdovirus bacopae
- Cytorhabdovirus bemisiae
- Cytorhabdovirus betatrifolii; Trifolium pratense cytorhabdovirus B
- Cytorhabdovirus betawuhaninsectum; Wuhan 5 insect cytorhabdovirus
- Cytorhabdovirus brassicae; Broccoli necrotic yellows cytorhabdovirus
- Cytorhabdovirus brassicicolae; Cabbage cytorhabdovirus
- Cytorhabdovirus broussonetiae
- Cytorhabdovirus caricae; Papaya cytorhabdovirus
- Cytorhabdovirus chrysanthemi
- Cytorhabdovirus colocasiae; Colocasia bobone disease-associated cytorhabdovirus
- Cytorhabdovirus cucurbitae
- Cytorhabdovirus festucae; Festuca leaf streak cytorhabdovirus
- Cytorhabdovirus flaviyerbamate; Yerba mate chlorosis-associated cytorhabdovirus
- Cytorhabdovirus fragariae; Strawberry cytorhabdovirus 1
- Cytorhabdovirus fragariarugosus; Strawberry crinkle cytorhabdovirus
- Cytorhabdovirus gammawuhaninsectum; Wuhan 6 insect cytorhabdovirus
- Cytorhabdovirus glehniae
- Cytorhabdovirus gramineae; Northern cereal mosaic cytorhabdovirus
- Cytorhabdovirus hordei; Barley yellow striate mosaic cytorhabdovirus
- Cytorhabdovirus kenyatuberosum
- Cytorhabdovirus lactucamaculante; Lettuce yellow mottle cytorhabdovirus
- Cytorhabdovirus lactucanecante; Lettuce necrotic yellows cytorhabdovirus
- Cytorhabdovirus lycopersici; Tomato yellow mottle-associated cytorhabdovirus
- Cytorhabdovirus maydis; Maize-associated cytorhabdovirus
- Cytorhabdovirus maysflavostriatis; Maize yellow striate cytorhabdovirus
- Cytorhabdovirus medicagonis; Alfalfa dwarf cytorhabdovirus
- Cytorhabdovirus nymphaeae
- Cytorhabdovirus orchidaceae
- Cytorhabdovirus oryzae; Rice stripe mosaic cytorhabdovirus
- Cytorhabdovirus persimmon; Persimmon cytorhabdovirus
- Cytorhabdovirus rosae
- Cytorhabdovirus rubus; Raspberry vein chlorosis cytorhabdovirus
- Cytorhabdovirus sonchi; Sonchus cytorhabdovirus 1
- Cytorhabdovirus tagetis
- Cytorhabdovirus trachyspermi
- Cytorhabdovirus trichosanthei; Trichosanthes cytorhabdovirus
- Cytorhabdovirus tritici; Wheat American striate mosaic cytorhabdovirus
- Cytorhabdovirus yerbamate; Yerba mate cytorhabdovirus
References[edit]
- ^ Walker, PJ; Blasdell, KR; Calisher, CH; Dietzgen, RG; Kondo, H; Kurath, G; Longdon, B; Stone, DM; Tesh, RB; Tordo, N; Vasilakis, N; Whitfield, AE; Ictv Report, Consortium (19 February 2018). "ICTV Virus Taxonomy Profile: Rhabdoviridae". The Journal of General Virology. 99 (4): 447–448. doi:10.1099/jgv.0.001020. hdl:10871/31776. PMID 29465028.
- ^ a b c d "ICTV Online Report Rhabdoviridae".
- ^ a b c d "Viral Zone". ExPASy. Retrieved 15 June 2015.
- ^ "Virus Taxonomy: 2022 Release". International Committee on Taxonomy of Viruses (ICTV). March 2023. Retrieved 14 September 2023.